Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M16
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 166 RCAKMWGARRENCXNHCQCSGLITE-NFRINSGNNATKRKQEEAFSHNYKKKMYPHSLSF 342
           +CAK+WG   +N   +C      TE  F  N G NA  ++ ++  + N K  +       
Sbjct: 489 QCAKLWGPTGKNGDENCYRKN--TEGTFHGNCGTNAHTKEIKKCETENAKCGLLQCETQA 546

Query: 343 DQSPGPSKRRILSEHTKLYTQL 408
           ++        +   H+ +Y+ L
Sbjct: 547 ERPVFGDPGSVTFSHSTVYSSL 568


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +1

Query: 166 RCAKMWGARRENCXNHCQCSGLITE-NFRINSGNNATKRKQEEAFSHNYKKKMYPHSLSF 342
           +CAK+WG   +N   +C      TE  F  N G NA  ++ ++  + N K  +       
Sbjct: 489 QCAKLWGPTGKNGDENCYRKN--TEGTFHGNCGTNAHTKEIKKCETENAKCGLLQCETQA 546

Query: 343 DQSPGPSKRRILSEHTKLYTQL 408
           ++        +   H+ +Y+ L
Sbjct: 547 ERPVFGDPGSVTFSHSTVYSSL 568


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,631
Number of Sequences: 27780
Number of extensions: 232187
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)