Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M14
         (1220 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   1.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   4.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   4.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   6.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   6.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   6.1  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 645 ECKQSIFRRRAGHSRGSCRPTRRSTVGFLLKHTD 544
           +C  S  R+     +G+C+  R   VG+ LK  D
Sbjct: 61  QCSNSPLRKARYTEKGTCKMGREIEVGYDLKSPD 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 185 CNSCFSGTGSPNKTGNFIH 241
           C+ C+S  G+ +K G  IH
Sbjct: 298 CDVCYSTIGTVSKAGELIH 316


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 314 IGRVFSFEGLPIRRLH 267
           + +  SFE LP RRLH
Sbjct: 47  VSKPVSFESLPNRRLH 62


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 185 CNSCFSGTGSPNKTGNFIH 241
           C+ C+S     NK G  IH
Sbjct: 577 CDVCYSTIEEANKAGELIH 595


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 185 CNSCFSGTGSPNKTGNFIH 241
           C+ C+S     NK G  IH
Sbjct: 302 CDVCYSTIEEANKAGELIH 320


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
 Frame = -1

Query: 899 FIHVGVVHDSG----PGVSVARQHIHDPG 825
           F+H G+VH+ G    P  +V+   +  PG
Sbjct: 72  FVHSGMVHNDGTQLMPSPTVSGSEMSSPG 100


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
 Frame = -1

Query: 899 FIHVGVVHDSG----PGVSVARQHIHDPG 825
           F+H G+VH+ G    P  +V+   +  PG
Sbjct: 72  FVHSGMVHNDGTQLMPSPTVSGSEMSSPG 100


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -3

Query: 210 PVPLKQLLQNSLFAPEPICRRSATFLIYLYVPKYTRQNNLLQLPAQVCL 64
           P+PL  +   ++  P  IC  SA  LI++ V ++ R      +PA  CL
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV-QWVR-----SIPAFTCL 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,936
Number of Sequences: 336
Number of extensions: 5435
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35658067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)