Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_M14
(1220 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 254 2e-68
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 235 1e-62
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 163 4e-41
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 157 3e-39
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 149 1e-36
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 75 2e-14
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 63 7e-11
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 27 5.3
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 9.2
SPBC725.14 |arg6||acetylglutamate synthase Arg6 |Schizosaccharom... 26 9.2
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 26 9.2
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 254 bits (621), Expect = 2e-68
Identities = 125/250 (50%), Positives = 164/250 (65%), Gaps = 2/250 (0%)
Frame = +3
Query: 243 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 422
GLFINN+ V S G K +P+ ++I EV F+ +PWR
Sbjct: 24 GLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFS 83
Query: 423 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 602
+++RG +++LAD IE++ YLAS+ETLDNGK + GD+ A+ RYY GWADK +
Sbjct: 84 SAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLAR-GDVQAAADCFRYYGGWADKDY 142
Query: 603 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 782
G + D K FAYTRHEP+GVCGQIIPWNFP LM AWK+ PA+A G T+++K AE TPL+
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLS 202
Query: 783 ALYIAQLVKEAGFPPGVVNMLPGYG-DTGAAIVDHPDVDKVAFTGSTEVGKLIQRGAA-S 956
AL + + V E GFPPGV+N+L G G G AI H D+DKVAFTGST VG+++ R AA S
Sbjct: 203 ALCLTKFVPECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAAASS 262
Query: 957 XIKRITLXLG 986
+K++TL LG
Sbjct: 263 NLKKVTLELG 272
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 235 bits (574), Expect = 1e-62
Identities = 115/249 (46%), Positives = 163/249 (65%), Gaps = 1/249 (0%)
Frame = +3
Query: 243 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 422
GL+IN EW KS++ T++T +P+ +VIA+V FK W+ +
Sbjct: 22 GLYINGEWHKSAE--TWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT---WKKVP 76
Query: 423 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 602
SE+G L+ KLA+L E+ LA++E +D+GKP + GD+ +I LRY AGWADKI+
Sbjct: 77 GSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIY 136
Query: 603 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 782
G V+P + AY + P+GVCGQI+PWN+P+ MA WK+ PALA G +++K AE TPL+
Sbjct: 137 GQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLS 196
Query: 783 ALYIAQLVKEAGFPPGVVNMLPGYGD-TGAAIVDHPDVDKVAFTGSTEVGKLIQRGAASX 959
LY A LV+EAGFP GVVN++ G G G+ + HP +DK+AFTGST+VG ++Q+ AAS
Sbjct: 197 LLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAASN 256
Query: 960 IKRITLXLG 986
+K +TL G
Sbjct: 257 LKAVTLECG 265
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 163 bits (396), Expect = 4e-41
Identities = 92/249 (36%), Positives = 143/249 (57%), Gaps = 3/249 (1%)
Frame = +3
Query: 249 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 428
+I +WV ++ GKTF ENP + +A V F +R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFL---SYRNSDIK 83
Query: 429 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 608
ER A++ + DLI + LA++ TL+NGK D+ G++ + K + ++AG A +I G+
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAK-GEVVYAAKFIDWFAGEALRISGD 142
Query: 609 V-LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTA 785
+ ++ + T +PVGV G I PWNFP M K+G ALA GCTVV++PA +TP TA
Sbjct: 143 SSMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTA 202
Query: 786 LYIAQLVKEAGFPPGVVNMLPGY--GDTGAAIVDHPDVDKVAFTGSTEVGKLIQRGAASX 959
L +A+L + AG P GV+NM+ + G + +P + KV+FTGST VGK++ + ++S
Sbjct: 203 LALAKLAERAGVPAGVLNMVTANSPSEHGIELTTNPLIRKVSFTGSTNVGKILAKQSSST 262
Query: 960 IKRITLXLG 986
+K+++L LG
Sbjct: 263 LKKLSLELG 271
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 157 bits (381), Expect = 3e-39
Identities = 87/250 (34%), Positives = 136/250 (54%), Gaps = 4/250 (1%)
Frame = +3
Query: 249 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 428
F+ +W+ S + KTF+ +NPA G++I +V FK ++
Sbjct: 21 FVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKT---YKNFTHV 77
Query: 429 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 608
+R L+ + A+LI ++ L + TL+NGKP + ++ L++YA A + G+
Sbjct: 78 QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEM-EVTTCSGYLKWYAAEAVRTFGD 136
Query: 609 VLPAD--GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 782
V P+ + F + +PVGV I PWNFP M A K G ALA GCT + PA +TP
Sbjct: 137 VAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYV 196
Query: 783 ALYIAQLVKEAGFPPGVVNMLPGYGDT--GAAIVDHPDVDKVAFTGSTEVGKLIQRGAAS 956
L + +L +EAGFP GV+N++ + G + +P V KV+FTGST VGK++ +AS
Sbjct: 197 CLGLVRLAQEAGFPDGVLNVITSSDASAHGKELTTNPIVRKVSFTGSTNVGKILMGQSAS 256
Query: 957 XIKRITLXLG 986
IK++++ LG
Sbjct: 257 TIKKVSMELG 266
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 149 bits (360), Expect = 1e-36
Identities = 90/253 (35%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Frame = +3
Query: 246 LFINNEWVKSSD--GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTM 419
LFI+ ++V + K NPA ++I + F+ G W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTFRSGI-WAKW 81
Query: 420 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI 599
+RG ++ K+A ++ R LA ++T++ GKP + F D+ + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALF-DIDSCADMFEYYAEVAETD 140
Query: 600 HGNV---LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQ 770
+ V LP + + A+ + P GV G I PWNFP+ MA WKL PA+A+G VV+KP+E
Sbjct: 141 NPTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSEL 200
Query: 771 TPLTALYIAQLVKEAGFPPGVVNMLPGYG-DTGAAIVDHPDVDKVAFTGSTEVGKLIQRG 947
P + L A + KEAG P GV+N++ G G ++GAA+ HP + +AFTGS GK I
Sbjct: 201 APWSCLEFALICKEAGLPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHA 260
Query: 948 AASXIKRITLXLG 986
AA I +TL LG
Sbjct: 261 AAENIVPLTLELG 273
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 74.9 bits (176), Expect = 2e-14
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Frame = +3
Query: 408 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRY-YAG 584
W++ +ER + L + I R++ A + D GK D+ FG++ +++ + + A
Sbjct: 41 WKSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLAN 100
Query: 585 WADKIHGNVLPAD---GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVM 755
+ P Y ++EP+GV ++ WN+P+ A + AL G +V+
Sbjct: 101 GEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVV 160
Query: 756 KPAEQTP-LTALY---IAQLVKEAGFPPGVVNMLPGYGDTGAAIVDHPDVDKVAFTGSTE 923
K +E T T Y + L++ G P +V + D + H + + F GS
Sbjct: 161 KGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQP 220
Query: 924 VGKLIQRGAASXIKRITLXLG 986
+ KL+ AA + + L LG
Sbjct: 221 IAKLVAASAAKQLTPLCLELG 241
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 63.3 bits (147), Expect = 7e-11
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 408 WRTMDASERGALINKLADLIERDRTY-LASLETLDNGKPYKDSYFGDLYASIKNLRYYAG 584
W ++ ++R A+ K A LI Y L + + GK + I LR+
Sbjct: 97 WESLPFADRSAIFLKAAHLISTKYRYKLMAATMIGQGKNIWQAEIDAGMEIIDFLRFNTK 156
Query: 585 WADKIHGNVLPADGK-YFAYTRHEPV-GVCGQIIPWNFPILMAAWKLGPALATGCTVVMK 758
+A +++ + P + + + P+ G I P+NF + P L G V+MK
Sbjct: 157 YASELYASQPPENTPGVWNRMEYRPLEGFVYAITPFNFTAIAGNLAAAPLLM-GNVVLMK 215
Query: 759 PAEQTPLTALYIAQLVKEAGFPPGVVNMLPGYG-DTGAAIVDHPDVDKVAFTGSTEV 926
P++ L++ + Q+ +EAG P G + +PG + +HP+ + FTGST V
Sbjct: 216 PSDHAVLSSYIVYQIFREAGLPAGALQFIPGDAVEVSKVCFNHPEFAGLHFTGSTAV 272
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 581 RVGRQDPRECPA-RRRKILCLHSS*ASGCVRSDNTMELPYIDGG 709
+ R+ C A RR+K+ C H S C++ YID G
Sbjct: 14 QTSRRAIHSCLACRRKKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 VAERLQIGSGAKSEFCNSCFSGTGSPNKT-GNFIHWSLHKQ*VGEV 274
+A + + + CN+ G NK GN IH+ L K G+V
Sbjct: 1054 LAHEINAADSSSEQICNALRRGFLRLNKKLGNVIHYDLRKSSEGDV 1099
>SPBC725.14 |arg6||acetylglutamate synthase Arg6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 585 TRRSTVGFLLKHTDHRNTSP 526
+RRST GFL KH+ ++ SP
Sbjct: 19 SRRSTKGFLQKHSSLKDGSP 38
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 940 WISLPTSVDPVKATLSTSGWSTIAAPVSP 854
W+ +PT DPV A+LS W ++P
Sbjct: 125 WL-IPTEGDPVSASLSLPPWKEAVRIITP 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,195,228
Number of Sequences: 5004
Number of extensions: 85868
Number of successful extensions: 230
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 661404424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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