Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M13
         (1158 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   1.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   5.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 476 QESDEEKRDVMRDYPGMYDQLHQEEMGYRKEDLKK 580
           ++ +EE  D  +D P + D    E+   +KED KK
Sbjct: 231 EKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKK 265


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 530 HTFLGSLSLRHASLRHFPGRLQISTNQNLSS 438
           H  L S  +   +   FPGRL ++T Q+  S
Sbjct: 281 HVMLLSDWMHEDATERFPGRLAVNTGQDPES 311


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 530 HTFLGSLSLRHASLRHFPGRLQISTNQNLSS 438
           H  L S  +   +   FPGRL ++T Q+  S
Sbjct: 281 HVMLLSDWMHEDATERFPGRLAVNTGQDPES 311


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 581 LS*GLLSYIPFLLGVADHTFLGSL 510
           +S  L S++P ++   DH FL  +
Sbjct: 183 VSYNLFSFVPLVVNALDHLFLNDI 206


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 581 LS*GLLSYIPFLLGVADHTFLGSL 510
           +S  L S++P ++   DH FL  +
Sbjct: 139 VSYNLFSFVPLVVNALDHLFLNDI 162


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -3

Query: 685 ISHRIIIKFDITHSHH--RHYIHVS-NKLEKIVDKQVNFLEVFFPIS 554
           I H  II     HS +   ++I+ S N    I DK  NF+  FF +S
Sbjct: 30  IVHIFIIIALYAHSSYGRENFIYGSMNMTVAITDKIANFMLTFFNVS 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,254
Number of Sequences: 336
Number of extensions: 6230
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33712719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)