Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_M13
(1158 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0158 - 14951504-14951568,14952722-14952797,14952876-149529... 58 2e-08
01_01_0338 + 2718212-2718251,2718519-2718607,2718997-2719050,271... 54 2e-07
01_01_0340 + 2727135-2727205,2727470-2727639,2728418-2728506,272... 54 3e-07
03_05_0537 + 25363026-25363217,25363672-25363828,25364660-253646... 52 9e-07
04_03_0113 + 11388585-11388655,11388741-11388852,11390182-113902... 42 0.001
08_02_0558 + 18668856-18668926,18669064-18669175,18669834-186698... 37 0.035
01_01_0343 + 2744123-2744311,2745238-2745291,2745517-2745587,274... 35 0.11
01_01_0339 + 2720647-2720790,2721241-2721282,2721580-2721761,272... 33 0.43
10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777 29 5.3
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 29 5.3
03_05_0927 - 28874819-28877098,28877689-28877691 29 5.3
03_05_0838 + 28093752-28094011,28095238-28095508,28095640-280958... 29 5.3
>03_03_0158 -
14951504-14951568,14952722-14952797,14952876-14952943,
14952997-14953156,14953239-14953425,14953982-14953986
Length = 186
Score = 57.6 bits (133), Expect = 2e-08
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +2
Query: 134 PFVYWAQTESTISLKIDLKNA--LKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNI 307
P WAQ + L I+L +A +K ++K + IF+AKG ++ YE +L+LF +
Sbjct: 5 PSTKWAQRSDKVFLTIELPDARDVKLNLKP-EGQFIFSAKGPA--DDTPYELDLELFDAV 61
Query: 308 KSFEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKP-AWLKINFDLWKSEDGQE 481
E V I +++K + WWPRL + KP +LK+++D W+ ED ++
Sbjct: 62 NV-----EESKAAVAARSICYLIKKAESKWWPRLLKKEGKPPVFLKVDWDKWQDEDDED 115
>01_01_0338 + 2718212-2718251,2718519-2718607,2718997-2719050,
2719201-2719271,2719375-2719456,2719561-2719657,
2719752-2719873
Length = 184
Score = 54.4 bits (125), Expect = 2e-07
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +2
Query: 740 EVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPXVFYLXVVWTCIEXVRYP 919
++LH + G + V Q+ R F+ + ++ + P + V L + W+ E +RY
Sbjct: 7 QILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 66
Query: 920 YY-MSQLYKKEFALLTWLXYXXWIXLYPXGIVCEAXIILRNIPYL 1051
++ M + + + L WL Y ++ LYP GI E +I +PY+
Sbjct: 67 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYM 111
>01_01_0340 + 2727135-2727205,2727470-2727639,2728418-2728506,
2729017-2729070,2729310-2729380,2729504-2729585,
2729678-2729774,2729902-2729972
Length = 234
Score = 53.6 bits (123), Expect = 3e-07
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Frame = +2
Query: 572 LKKVYLFIYNLFQFXXXXXXXXXXXXXXXKLDYDSVTDTYEHVGSAMKFLQLMQYLEVLH 751
++++YL IYN F +++V Y + + F Q LEVL
Sbjct: 8 VRRLYLSIYNWVAFIGWAQVLCYMTLALLDKGHEAV---YAAIERPLLFTQTAAILEVLV 64
Query: 752 -----PMF--------GYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPXVFYLXVVW 892
P+F G + V Q+TGR F+ + ++ + P Q+ V L + W
Sbjct: 65 FPSSLPLFIRENWRLRGLVRSPVSSTLPQITGRLFITWGILWSFPETQSYIFVTSLLICW 124
Query: 893 TCIEXVRYPYY-MSQLYKKEFALLTWLXYXXWIXLYPXGIVCEAXIILRNIPYL 1051
IE RY +Y M + + + L WL Y +I +P G+V E + +P++
Sbjct: 125 CIIEVTRYSFYGMKESFGFTPSWLLWLRYSTFIACFPVGVVSEICLAYTVLPFM 178
>03_05_0537 +
25363026-25363217,25363672-25363828,25364660-25364694,
25364803-25364848,25365277-25365311
Length = 154
Score = 52.0 bits (119), Expect = 9e-07
Identities = 38/118 (32%), Positives = 57/118 (48%)
Frame = +2
Query: 134 PFVYWAQTESTISLKIDLKNALKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKS 313
P V WAQ I L I L +A K V + +F+ A GE + F L+LF ++
Sbjct: 7 PEVLWAQRSEKIYLTISLPDA-KDVVLKTEPQGLFSFLAV-ANGEP-FSFTLELFDSVL- 62
Query: 314 FEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFDLWKSEDGQESD 487
P G ++ I +QK K WW RL +K ++K++++ W ED +ESD
Sbjct: 63 --PEGSKTKTKMGLRNIICSIQKEKKGWWKRLLKSEEKHPYIKVDWNKWCDED-EESD 117
>04_03_0113 + 11388585-11388655,11388741-11388852,11390182-11390235,
11390386-11390456,11390560-11390641,11390741-11390837,
11390914-11391053
Length = 208
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 878 LXVVWTCIEXVRYPYY-MSQLYKKEFALLTWLXYXXWIXLYPXGIVCEAXIILRNIPYL 1051
L + W+ E +RY ++ M + + + L WL Y ++ LYP GI E +I +PY+
Sbjct: 71 LVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYM 129
>08_02_0558 + 18668856-18668926,18669064-18669175,18669834-18669887,
18670121-18670191,18670291-18670372,18670463-18670559,
18670928-18670998
Length = 185
Score = 36.7 bits (81), Expect = 0.035
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 818 VLFIMIDAEPRMQTKPXVFYLXVVWTCIEXVRYPYY-MSQLYKKEFALLTWLXYXXWIXL 994
+LF A T V L + W E RY +Y M + + + L WL Y +I
Sbjct: 51 LLFAQTAAIMETHTHIFVTSLLISWCITEVTRYCFYGMKESFGFTPSWLLWLRYSTFIVC 110
Query: 995 YPXGIVCEAXIILRNIPYL 1051
P G V E +I +P++
Sbjct: 111 LPVGTVSEVGLIYIVLPFM 129
>01_01_0343 + 2744123-2744311,2745238-2745291,2745517-2745587,
2745704-2745785,2746242-2746340
Length = 164
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 848 RMQTKPXVFYLXVVWTCIEXVRYPYY-MSQLYKKEFALLTWLXYXXWIXLYPXGIVCEAX 1024
++ T V L + W E RY + M + + + L WL Y +I +P G+V E
Sbjct: 63 QIHTHIFVTSLLISWCITEVTRYSFNGMKESFGFTPSWLLWLRYSTFIVCFPIGMVSEVG 122
Query: 1025 IILRNIPYL 1051
++ +P++
Sbjct: 123 LVYIVVPFM 131
>01_01_0339 + 2720647-2720790,2721241-2721282,2721580-2721761,
2721828-2721939,2722814-2722867,2723077-2723115,
2723116-2723186,2723313-2723394,2723493-2723589,
2723727-2723797
Length = 297
Score = 33.1 bits (72), Expect = 0.43
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 884 VVWTCIEXVRYPYY-MSQLYKKEFALLTWLXYXXWIXLYPXGIVCEAXIILRNIPYL 1051
+ + ++ +RY ++ + + + + L WL Y +I YP G+V E +I P++
Sbjct: 185 IYYNSLQVIRYSFFGIKESFGFTPSWLLWLRYSTFIVCYPVGMVSEVGLIYIAFPFM 241
>10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777
Length = 323
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = -1
Query: 456 KSKFIFNQAGFCGCAVRRGH-HTGFTFCKIS----SILFSNTRSVIC 331
K K ++N+A C A GH H GF+ C + + +NT+ C
Sbjct: 67 KEKIVWNEAALCAAADDDGHVHGGFSCCPFNVALVGVASNNTQMFAC 113
>08_01_0505 -
4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 338 TLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFD-LWKSEDGQESDEE 493
T+++F +L + P WP ++ + KI D ++K +DGQE DE+
Sbjct: 610 TIKLFTIVEDLKIDMFTPTGWPSVSGDVLRSLAGKIPTDHIYKIDDGQEFDED 662
>03_05_0927 - 28874819-28877098,28877689-28877691
Length = 760
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 751 SYVWLYEGWSSSTIPTSYGQSLCTVYND 834
SY+WL++ W ++ + + + SL TVYN+
Sbjct: 409 SYIWLFQNWIAA-MGSHHPTSLTTVYNE 435
>03_05_0838 + 28093752-28094011,28095238-28095508,28095640-28095810,
28096238-28096369
Length = 277
Score = 29.5 bits (63), Expect = 5.3
Identities = 25/98 (25%), Positives = 47/98 (47%)
Frame = +2
Query: 755 MFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPXVFYLXVVWTCIEXVRYPYYMSQ 934
+FG KGG+LV F G + F+ ++ +P + +L W E +R Y+ S+
Sbjct: 130 LFGVVKGGILVVFTATAGASSCYFV-----SKLIGRPLISWL---WP--EKLR--YFQSE 177
Query: 935 LYKKEFALLTWLXYXXWIXLYPXGIVCEAXIILRNIPY 1048
+ K++ LL ++ + P + A I+ +IP+
Sbjct: 178 IAKRKEKLLNYMLFLRITPTLPNTFINMASPIV-DIPF 214
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,187,560
Number of Sequences: 37544
Number of extensions: 560230
Number of successful extensions: 1265
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3526513192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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