Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M13
         (1158 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical pr...    69   8e-12
Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical pr...    66   3e-11
AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical...    54   2e-07
AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchang...    31   2.0  
Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical pr...    30   2.7  

>U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical
           protein ZC395.10 protein.
          Length = 175

 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 40/120 (33%), Positives = 57/120 (47%)
 Frame = +2

Query: 134 PFVYWAQTESTISLKIDLKNALKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKS 313
           P V WAQ ES + L I++  A   ++K   N + F     G+    +YE  L+ F  I  
Sbjct: 5   PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQ----GSSKTDKYEATLEFFDEIDP 60

Query: 314 FEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFDLWKSEDGQESDEE 493
                   + RV    +E+ +QK  P WWPRL     K  WLK++F  WK ED  +  E+
Sbjct: 61  ASVKHTGSSTRV----VEITVQKKTPAWWPRLLQNKGKVHWLKVDFGKWKDEDEDDEAED 116


>Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical protein
            R10E4.9 protein.
          Length = 202

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 46/155 (29%), Positives = 66/155 (42%)
 Frame = +2

Query: 569  DLKKVYLFIYNLFQFXXXXXXXXXXXXXXXKLDYDSVTDTYEHVGSAMKFLQLMQYLEVL 748
            D K + LFIY L  F                 ++      Y  +   + F+  +QYL++ 
Sbjct: 3    DFKNMILFIYTLVLFILHGYGFLYIFHAEYTSEFK-----YPEIMWFLLFITSLQYLDIP 57

Query: 749  HPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPXVFYLXVVWTCIEXVRYPYYM 928
               F  TK   +  F+QV+GR  VL++   A   +  K   F L  V+   E  R PYY+
Sbjct: 58   FSFF-LTKSNPVAVFVQVSGRLLVLWV---ASHMVSWKYAAFSLVAVYLLSELCRGPYYL 113

Query: 929  SQLYKKEFALLTWLXYXXWIXLYPXGIVCEAXIIL 1033
            S         LTWL Y  +  LYP G  CEA + +
Sbjct: 114  SNCLGTPNRSLTWLRYNAFKVLYPVGFTCEALVFI 148


>AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical
            protein T15B7.2 protein.
          Length = 218

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
 Frame = +2

Query: 689  YEHVGSAMKFLQLMQYLEVLHPMFGYTKGGVLVPFLQVTGRAFVLFIMIDAEPRMQTKPX 868
            YE V   +K  Q    LEV+H + G  +  V    +QVT R  +++ ++      +    
Sbjct: 39   YESVEFELKIFQTAAILEVIHAIVGLVRSPVGTTAMQVTSRVVLVWPILHLCSTARFSIG 98

Query: 869  VFYLXVVWTCIEXVRYPYYMSQLYKKEFA-LLTWLXYXXWIXLYPXGIVCEAXIILRNI 1042
            V  L V W+  E +RY +Y   + K+     L +L Y  +  LYP G+  E   +  ++
Sbjct: 99   VPLLLVAWSVTEVIRYSFYALSVLKQPIPYFLLYLRYTLFYVLYPMGVSGELLTLFASL 157


>AF016420-5|AAB65309.1|  651|Caenorhabditis elegans Na/ca exchangers
           protein 9 protein.
          Length = 651

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +2

Query: 290 DLFSNIKSFEPGGEHITLRVFENRIELILQKVKPVWWPRLTAQPQKPAWLKINFDL 457
           DLF+++KS+    E   + +F   + +I  KV PV++ +LT    + +W K  F L
Sbjct: 380 DLFNHLKSWPSRDEFSEMNIFIKIVTVI--KVVPVFFFKLTVPSNEMSWCKPLFIL 433


>Z70203-4|CAA94107.1|  322|Caenorhabditis elegans Hypothetical
           protein C05G5.4 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 197 LKPDVKVLDNNVIFTAKGTGARGESQYEFNLDLFSNIKSFEPGGEHITLRVFEN 358
           +  D KV+     FT K     G+   E+N  +   + + + G EH+ L VF+N
Sbjct: 30  INKDTKVIVQG--FTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKN 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,192,493
Number of Sequences: 27780
Number of extensions: 537179
Number of successful extensions: 1550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)