Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M11
         (1193 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL136605-1|CAB66540.1|  315|Homo sapiens hypothetical protein pr...   184   7e-46
BC007110-1|AAH07110.2|  310|Homo sapiens C11orf54 protein protein.    182   2e-45
CR533538-1|CAG38569.1|  315|Homo sapiens PTD012 protein.              181   4e-45
BC012298-1|AAH12298.1|  265|Homo sapiens chromosome 11 open read...    95   6e-19
AF079564-1|AAC28392.1|  353|Homo sapiens ubiquitin-specific prot...    31   6.2  
AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein.            31   8.2  
AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein.     31   8.2  

>AL136605-1|CAB66540.1|  315|Homo sapiens hypothetical protein
           protein.
          Length = 315

 Score =  184 bits (447), Expect = 7e-46
 Identities = 94/236 (39%), Positives = 139/236 (58%), Gaps = 3/236 (1%)
 Frame = +1

Query: 184 DAVACVLSNGLTTXFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVK 363
           + +A V+  GL   F  V+VSV D P LT+ P+     G+ G  ++ E GG PYL+P V 
Sbjct: 14  EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVN 73

Query: 364 RDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSV 537
           + K+YDL K+ + +    AF+ GAGAGP+  LG N E   ++     +     G+    V
Sbjct: 74  QKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHV 133

Query: 538 HPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRE 717
           +P         Y ++     + + ALL N   +EG+PGKVI+V AK RTG  NF+T +RE
Sbjct: 134 NPADGGCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRE 190

Query: 718 TLKTHYGDKVVGLGGAFVLRAGRGYFHVMP-DFSRAPLCSDAAVDSWLHYFELDAP 882
           TL+ HYG+K +G+GG F+++ G+   H+MP +FS  PL SD  V+ WLH++E+ AP
Sbjct: 191 TLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 246


>BC007110-1|AAH07110.2|  310|Homo sapiens C11orf54 protein protein.
          Length = 310

 Score =  182 bits (444), Expect = 2e-45
 Identities = 93/231 (40%), Positives = 136/231 (58%), Gaps = 3/231 (1%)
 Frame = +1

Query: 199 VLSNGLTTXFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVKRDKIY 378
           V+  GL   F  V+VSV D P LT+ P+     G+ G  ++ E GG PYL+P V + K+Y
Sbjct: 14  VMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVY 73

Query: 379 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGA 552
           DL K+ + +    AF+ GAGAGP+  LG N E   ++     +     G+    V+P   
Sbjct: 74  DLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADG 133

Query: 553 PKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTH 732
                 Y ++     + + ALL N   +EG+PGKVI+V AK RTG  NF+T +RETL+ H
Sbjct: 134 GCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKH 190

Query: 733 YGDKVVGLGGAFVLRAGRGYFHVMP-DFSRAPLCSDAAVDSWLHYFELDAP 882
           YG+K +G+GG F+++ G+   H+MP +FS  PL SD  V+ WLH++E+ AP
Sbjct: 191 YGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 241


>CR533538-1|CAG38569.1|  315|Homo sapiens PTD012 protein.
          Length = 315

 Score =  181 bits (441), Expect = 4e-45
 Identities = 93/236 (39%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
 Frame = +1

Query: 184 DAVACVLSNGLTTXFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVK 363
           + +A V+  GL   F  V+VSV D P LT+ P+     G+ G  ++ E GG PYL+P V 
Sbjct: 14  EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVN 73

Query: 364 RDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSV 537
           + K+YDL K+ + +    AF+ GAGAGP+  LG N E   ++     +     G+    V
Sbjct: 74  QKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHV 133

Query: 538 HPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRE 717
           +P         Y ++     + + ALL N   +EG+PGKVI+V AK RTG  N +T +RE
Sbjct: 134 NPADGGCLLEKYSEK---CHDFQCALLANLFASEGQPGKVIEVKAKRRTGPLNLVTCMRE 190

Query: 718 TLKTHYGDKVVGLGGAFVLRAGRGYFHVMP-DFSRAPLCSDAAVDSWLHYFELDAP 882
           TL+ HYG+K +G+GG F+++ G+   H+MP +FS  PL SD  V+ WLH++E+ AP
Sbjct: 191 TLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 246


>BC012298-1|AAH12298.1|  265|Homo sapiens chromosome 11 open reading
           frame 54 protein.
          Length = 265

 Score = 94.7 bits (225), Expect = 6e-19
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
 Frame = +1

Query: 184 DAVACVLSNGLTTXFKFVEVSVADSPXLTEPPYYLKSPGLTGDAKLVEXGGPPYLVPQVK 363
           + +A V+  GL   F  V+VSV D P LT+ P+     G+ G  ++ E GG PYL+P V 
Sbjct: 14  EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVN 73

Query: 364 RDKIYDLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSV 537
           + K+YDL K+ + +    AF+ GAGAGP+  LG N E   ++     +     G+    V
Sbjct: 74  QKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHV 133

Query: 538 HPVGAPKGSSGYLQQQLPNDETRTALLGNYLLTEGKPGK 654
           +P         Y ++     + + ALL N   +EG+PGK
Sbjct: 134 NPADGGCLLEKYSEK---CHDFQCALLANLFASEGQPGK 169



 Score = 35.5 bits (78), Expect = 0.38
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 808 DFSRAPLCSDAAVDSWLHYFELDAP 882
           +FS  PL SD  V+ WLH++E+ AP
Sbjct: 172 EFSSCPLNSDEEVNKWLHFYEMKAP 196


>AF079564-1|AAC28392.1|  353|Homo sapiens ubiquitin-specific
           protease UBP41 protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 6.2
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 721 LKTHYGDKVVGLGGAFVLRAGRGYFHVMPDFSRAPLCSDAA--VDSWLHYFELDAP 882
           +  H G  + G   A+    G G +H   D S  P+ S      D++LH++EL +P
Sbjct: 294 VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHFYELASP 349


>AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein.
          Length = 2248

 Score = 31.1 bits (67), Expect = 8.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 766  FVLRAGRGYFHVMPDFSRAPLCSDAAVDSWL 858
            + L A RG FH++  F  +PLC +AA  +W+
Sbjct: 1779 YELCARRGIFHIILSFFHSPLCDEAA-QNWI 1808


>AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein.
          Length = 2046

 Score = 31.1 bits (67), Expect = 8.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 766  FVLRAGRGYFHVMPDFSRAPLCSDAAVDSWL 858
            + L A RG FH++  F  +PLC +AA  +W+
Sbjct: 1577 YELCARRGIFHIILSFFHSPLCDEAA-QNWI 1606


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,470,169
Number of Sequences: 237096
Number of extensions: 3172225
Number of successful extensions: 10490
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10472
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16789100150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)