Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M09
         (1224 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    44   0.011
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    38   0.40 
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4...    38   0.70 
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2...    35   3.7  
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    35   4.9  

>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 43.6 bits (98), Expect = 0.011
 Identities = 27/70 (38%), Positives = 28/70 (40%)
 Frame = +1

Query: 709 PRGLXXSXPAVYRXPVRLFPXGKGGXFXXXXLXGXSXXGRSSXPTWAVCXNPXFXPTVXX 888
           P  L  S PAV R PV  F              G S   RS  P+WAV  NP F PT   
Sbjct: 43  PLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAP 102

Query: 889 YXVXXX*IPT 918
           Y V     PT
Sbjct: 103 YPVTVHLSPT 112


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 38.3 bits (85), Expect = 0.40
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = +1

Query: 808 GXSXXGRSSXPTWAVCXNPXFXPTVXXYXVXXX*IPT 918
           G S   RS  P+WAVC NP F PT   Y V     PT
Sbjct: 86  GISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPT 122



 Score = 37.9 bits (84), Expect = 0.53
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 696 PWKXPXGAXXFXPCRLPXTCPXFSFXEGXXF 788
           P + P  A  F PCRLP TCP FS  E   F
Sbjct: 49  PLEAPSCALLFRPCRLPDTCPPFSLREAWRF 79


>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
           Bacteria|Rep: Putative uncharacterized protein 1 -
           Escherichia coli
          Length = 42

 Score = 37.5 bits (83), Expect = 0.70
 Identities = 16/34 (47%), Positives = 16/34 (47%)
 Frame = -1

Query: 921 PGWNSXXXYXIXXXGWXEXGVXAXSPGWXGXPTP 820
           PGW     Y I   G  E GV A SP W   PTP
Sbjct: 8   PGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41


>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           1 - Escherichia coli
          Length = 47

 Score = 35.1 bits (77), Expect = 3.7
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -1

Query: 921 PGWNSXXXYXIXXXGWXEXGVXAXSPGWXGXPTP 820
           PGW     Y I      E GV A SP W   PTP
Sbjct: 8   PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTP 41


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 34.7 bits (76), Expect = 4.9
 Identities = 18/57 (31%), Positives = 20/57 (35%)
 Frame = -1

Query: 921 PGWNSXXXYXIXXXGWXEXGVXAXSPGWXGXPTPX*XTXQXXXXKXXXLPXRKKXDR 751
           PGW     Y        E GV A SP W   P P   T      K    P  KK ++
Sbjct: 8   PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ 64


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,755,486
Number of Sequences: 1657284
Number of extensions: 5072631
Number of successful extensions: 6382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6084
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 124011183115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)