Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M08
         (1215 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    34   0.002
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   4.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +1

Query: 757 PEEIVKIFVAEIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSK 909
           P+ ++ I   ++A+ ++ L    V++RDL   N+L+     +++ DFGLS+
Sbjct: 591 PKHLLSI-ARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR 640


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 219 NLSFTICICGKLLVFVLTMLMI 154
           NLS   CICG +   +L  L I
Sbjct: 42  NLSINYCICGYIFSAILFSLSI 63


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 514 KVKKVSENKE-YALKVLSKAKIVNENAVRQVKEEAKIQTACGHHS 645
           K+KK S  K   AL+++++  + N + +   KEE ++Q   G  S
Sbjct: 282 KIKKASGTKNPLALQLMAQG-LYNHSTIPLTKEEEELQEMQGTKS 325


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 295 GYWLH*RRNVHLSCPQNG 242
           GY  H ++NV L CP  G
Sbjct: 241 GYQRHSKQNVALLCPAQG 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,265
Number of Sequences: 336
Number of extensions: 5779
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35452545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)