Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M08
         (1215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...   111   2e-26
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...   111   2e-26
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                56   6e-10
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    43   6e-06
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    43   6e-06
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    40   3e-05
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    40   4e-05

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score =  111 bits (266), Expect = 2e-26
 Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = +1

Query: 448 DLLQKDFQIQHTIAKGAFGDVYKVKKVSEN-KEYALKVLSKAKIVNENAVRQVKEEAKIQ 624
           DL  +D +   T+  G FG V  V+   ++ + +ALK + KA+IV     + +  E +I 
Sbjct: 361 DLRLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIM 420

Query: 625 TACGHHSFIVGAVSRWQTKKRIYIVSEYIPGGELLGLIEKYGKLPEEIVKIFVAEIAIAI 804
                  F+V     ++ +K +Y++ E   GGEL  ++   G   +   + + A +  A 
Sbjct: 421 GEADC-DFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAF 479

Query: 805 DFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSRTTTLCGTLNYMVWNLI 978
           D+LH+  +IYRDLKPEN+LLD++ +++L+DFG +K L  G +T T CGT  Y+   +I
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVI 537


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score =  111 bits (266), Expect = 2e-26
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
 Frame = +1

Query: 544 YALKVLSKAKIVNENAVRQVKEEAKIQTACGHHSFIVGAVSRWQTKKRIYIVSEYIPGGE 723
           YA+K+L K  I+ ++ V     E ++        F+V   S +QT  R+Y V EY+ GG+
Sbjct: 12  YAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGGD 71

Query: 724 LLGLIEKYGKLPEEIVKIFVAEIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGL 903
           L+  I++ GK  E +   + +EIAI + FLH  G++YRDLK +N+LLD + HI++ DFG+
Sbjct: 72  LMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131

Query: 904 SKWLSIGSRTT-TLCGT 951
            K    G +TT T CGT
Sbjct: 132 CKEGISGDKTTKTFCGT 148


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 56.0 bits (129), Expect = 6e-10
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
 Frame = +1

Query: 415  SIFLPEFPIKTDLLQKDFQIQ--HTIAKGAFGDVYKVKKVSENKEYALKVLSKAKIVNEN 588
            S F  + P +  +L+  F I+    +  G FG VYK   + + ++ A K++   K    N
Sbjct: 48   SPFNIDTPNRQKILKDGFPIKCGTFLGSGGFGIVYKA--LYKGEQVAAKIIQTEKY--SN 103

Query: 589  AVRQVKEEAKIQTACGHHSFIVGAVSRWQTKKRIYIVSEYIPGGELLGLIEKYGKLPEEI 768
             +   K  + ++     HS IV  +   Q      I  E + G  L   +++   +  E 
Sbjct: 104  MLNSEKHASFLK-----HSNIVKVLMIEQGASLSLITME-LCGTTLQNRLDEAILIKNER 157

Query: 769  VKIFVAEIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSRTTTLCG 948
            + I +  I  A+ F HNAG+++ D+KP+NIL+      +L DFG S  +   +      G
Sbjct: 158  ICI-LKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYG 216

Query: 949  TLNYMVWNLIRSNYKWQSASV 1011
            T  Y    +I+ N    +A +
Sbjct: 217  TPGYTAPEVIKQNRPTPAADI 237


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 42.7 bits (96), Expect = 6e-06
 Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +1

Query: 787 EIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFG--LSKWLSIGSRTTTLCGTLNY 960
           ++   I +LH+ G+++RD+K +N+LLD E   +L DFG  +++ + +GS    + GT  +
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS----IVGTPVH 760

Query: 961 MVWNLIRSNY 990
           M   L+  +Y
Sbjct: 761 MAPELLSGHY 770


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 42.7 bits (96), Expect = 6e-06
 Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
 Frame = +1

Query: 787 EIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFG--LSKWLSIGSRTTTLCGTLNY 960
           ++   I +LH+ G+++RD+K +N+LLD E   +L DFG  +++ + +GS    + GT  +
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS----IVGTPVH 798

Query: 961 MVWNLIRSNY 990
           M   L+  +Y
Sbjct: 799 MAPELLSGHY 808


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
 Frame = +1

Query: 472  IQHTIAKGAFGDVY--KVKKVSENK---EYALKVLSKAKIVNENAVRQVKEEAKIQTACG 636
            I+  I  G FGDV   K+K   + +   + A+K L       + A      EA I     
Sbjct: 635  IEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSA--DKARNDFLTEASIMGQFE 692

Query: 637  HHS--FIVGAVSRWQTKKRIYIVSEYIPGGELLGLIEKY-GKLPEEIVKIFVAEIAIAID 807
            H +  F+ G V++      + I++E++  G L   +    GK     +   +  IA  + 
Sbjct: 693  HPNVIFLQGVVTK---SNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQ 749

Query: 808  FLHNAGVIYRDLKPENILLDAECHIQLIDFGLSK 909
            +L     ++RDL   N+L++A    ++ DFGLS+
Sbjct: 750  YLAEMNYVHRDLAARNVLVNAALVCKIADFGLSR 783


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 39.9 bits (89), Expect = 4e-05
 Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
 Frame = +1

Query: 781 VAEIAIAIDFLHNAGVIYRDLKPENILLDAECH---IQLIDFGLS 906
           + +I  ++   H+ GV++RDLKPEN+LL ++     ++L DFGL+
Sbjct: 15  IQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,561
Number of Sequences: 438
Number of extensions: 6312
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41572845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)