Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M07
         (1162 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.47 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   2.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.47
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +1

Query: 559 WSAREFISCSYNACYIGYRN--EQKMDAKSGLQYMDSADL 672
           WS  E  SC YN  +I   +  E+++   SGL      DL
Sbjct: 184 WSPNEDYSCEYNLVWIKEESIYEERISVVSGLHEATLTDL 223


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 230 SWVEQEDHVVNELGNALQGQKVNAIICVAGGWAGGNA 340
           SW E + H +  + N         ++   GGW  GNA
Sbjct: 74  SWNEIDLHGLENVANLKSVNPDLKVLISIGGWNAGNA 110


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 409 CCNRGTPH*LTPHQVRLLAEVLSG 338
           C   G PH   PH  +L ++ + G
Sbjct: 484 CVVEGNPHCWVPHSCKLTSKEVPG 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,216
Number of Sequences: 336
Number of extensions: 4888
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33815816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)