Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M07
         (1162 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525...    30   3.0  
12_02_0244 - 16241243-16241279,16241781-16241848,16241930-162420...    29   5.3  
08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426     29   5.3  
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150...    29   7.0  
01_06_1088 - 34439311-34439987,34440080-34440136,34442790-344429...    29   7.0  
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284...    29   9.3  

>06_01_0721 -
           5255422-5255790,5256287-5256660,5256845-5257192,
           5257369-5257497,5257585-5257658,5257745-5257816,
           5257901-5257969,5258059-5258130,5258208-5258279,
           5258512-5258583,5258735-5258806,5258887-5258958,
           5259050-5259121,5259203-5259274,5259427-5259498,
           5259599-5259670,5259764-5259832,5260072-5260143,
           5260428-5260499,5260579-5260650,5260919-5260990,
           5261015-5261161,5261249-5261378,5262212-5262290
          Length = 931

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 699 IHFSNNSATKVSGVHVLKSAFGIHFLFISVSNVTGIIATANEFS 568
           ++  NN+ T    V  L + F ++ L +S +N+ G++ T N FS
Sbjct: 454 LNLKNNNIT--GDVSSLMNCFSLNILNVSYNNLAGVVPTDNNFS 495


>12_02_0244 -
           16241243-16241279,16241781-16241848,16241930-16242032,
           16242095-16242256,16242305-16242369,16242547-16242612,
           16242738-16242829,16243029-16243134,16243231-16243279,
           16243387-16243540,16243661-16243687,16243797-16243959,
           16244621-16244701
          Length = 390

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 676 HKGQRSPCTEVRFWHPFSVHFCIQCNR 596
           ++  RS C ++R W  +  H CI C +
Sbjct: 136 YEKSRSSCVQIRNWFDYRNHICIVCEK 162


>08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426
          Length = 284

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +2

Query: 485 PGMIGYGMAKAAVHQLTK--SLGAKDSGLPENSLAVAIMPVTLDTE-MNRKWM 634
           PG  GY  +K+A+H  TK  +L     G+  NS+A  I    +    + +KW+
Sbjct: 175 PGSTGYAASKSAMHYATKLMALELGAYGIRVNSIAPGIFKSEITAPLLQKKWL 227


>09_02_0504 -
           10013784-10014041,10014558-10014660,10014932-10015093,
           10015416-10015549,10015633-10015716,10015839-10016129,
           10016362-10016694,10016823-10016965,10017273-10017429,
           10017513-10017616,10017728-10017888,10017971-10018287,
           10018396-10018677,10018759-10019226,10019338-10019391,
           10019689-10019742,10019943-10020021,10020108-10020196,
           10021153-10021273,10022321-10022637
          Length = 1236

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 488 GMIGYGMAKAAVHQLTKSLGAKDSGLPENS-LAVAIMPVTLDTEMNRKWMPKADFSTWTP 664
           G + Y   +  V +  KS+G K    PE   +A  +  VT   +  + W+   D   + P
Sbjct: 360 GQVVYNGPRDHVLEFFKSVGFK---CPERKCVADFLQEVTSRKDQKQYWIGSDDTYQYVP 416

Query: 665 LTFVAELFEKW 697
           +T +AE F+ +
Sbjct: 417 VTMIAEAFQSF 427


>01_06_1088 -
           34439311-34439987,34440080-34440136,34442790-34442919,
           34443499-34443740,34443857-34444008,34444381-34444461,
           34444547-34444612,34444692-34444763,34444843-34444984,
           34445146-34445645,34446625-34447192,34447248-34447257
          Length = 898

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 635 PKADFSTWTPLTFVAELFEKWMKDEGRPA 721
           P+A FS ++P +F++ +F  W   +GR A
Sbjct: 295 PQALFSNFSPPSFLSSMFHNWFLRKGRRA 323


>04_04_0465 +
           25427065-25427113,25428099-25428227,25428387-25428479,
           25428681-25428953,25429037-25429288,25429735-25430118,
           25430243-25430483,25431986-25432736
          Length = 723

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 308 CVAGGWAGGNAAKDLSKQADLMWRQSVWSSSIAAT 412
           C +G + GG   +   ++A   W    WS   AAT
Sbjct: 592 CTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAAT 626


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,070,515
Number of Sequences: 37544
Number of extensions: 521421
Number of successful extensions: 1245
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)