Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_M01
         (1150 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.78 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   9.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.78
 Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 7/122 (5%)
 Frame = -3

Query: 653 GXXGPPXXGXXXXXXXPXPRGXPPXPXXXXXGIXXPXGPXXGGGXFXXXXXG--XGKPXG 480
           G  GPP  G       P P G  P P     G+  P  P    G       G     P  
Sbjct: 196 GNVGPPRTGTPTQPQPPRPGGMYPQP----PGVPMPMRPQMPPGAVPGMQPGMQPRPPSA 251

Query: 479 XXXXXXGGXGXPPXXKXXFXPXGXXPPPKXXP---XXGGGXXGGXFLP--PPXXXXGXXX 315
                    G PP  +    P G  P P+  P      GG   G   P  PP    G   
Sbjct: 252 QGMQRPPMMGQPPPIRPP-NPMG-GPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAP 309

Query: 314 GG 309
           GG
Sbjct: 310 GG 311


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = +2

Query: 953  GGGGGXXXPSGXPXGXKXGXKKXXGXXXXKTPXGGXPXGGG 1075
            GGGGG     G   G   G +        +   GG   GGG
Sbjct: 213  GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 9.6
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = -1

Query: 1096 FGXGXXXPPPXGXPPXGGFXPXXAP 1022
            F  G   PPP   PP     P   P
Sbjct: 776  FADGIGSPPPPPPPPPSSLSPGGVP 800


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.156    0.532 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,067
Number of Sequences: 2352
Number of extensions: 14663
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129164052
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)