Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L24
         (1144 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.81 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.81 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   1.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   2.5  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   2.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   10.0 

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 797 RPRCLKSNMFLGLDISPVSTS*SNFVIENCMES 699
           +P  +  N+ +GLDI+ ++   S+FV+   +E+
Sbjct: 207 KPCSINENLKMGLDIASITAQASSFVVWPLVEN 239


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 797 RPRCLKSNMFLGLDISPVSTS*SNFVIENCMES 699
           +P  +  N+ +GLDI+ ++   S+FV+   +E+
Sbjct: 207 KPCSINENLKMGLDIASITAQASSFVVWPLVEN 239


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 332 PSKLVFECFSVVGTYLCIVLSWMLTKY--SAC*RSSQWGPSPSVRGSVIF 189
           P K  + C     + +C+ L+W +     S     +Q+GP   V GS++F
Sbjct: 175 PLKAGYICTKTRASLICL-LAWFIAALFTSPILAITQYGPEEYVDGSIVF 223


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 374 WSVVPSTGNMKPTLP 330
           WS +  TGN  PTLP
Sbjct: 118 WSKLIETGNKPPTLP 132


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +3

Query: 627 EDYRNCVIIKRPCL--GLEGKGVL 692
           E+Y NC++ K+PC   G E K VL
Sbjct: 43  ENYVNCLLEKKPCTPDGEELKRVL 66


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 284 TNMYQLLKNIQKPV*MGGLASYYQWK 361
           TN+ Q+++ +Q P  + GL  + +WK
Sbjct: 448 TNL-QVIQWMQNPTELNGLRDFQEWK 472


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 284 TNMYQLLKNIQKPV*MGGLASYYQWK 361
           TN+ Q+++ +Q P  + GL  + +WK
Sbjct: 455 TNL-QVIQWMQNPTELNGLRDFQEWK 479


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 10.0
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = -1

Query: 859 QTRPPKGCRRCRWLY 815
           Q  PP     C WLY
Sbjct: 89  QANPPISTEHCDWLY 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,184
Number of Sequences: 336
Number of extensions: 6136
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33197234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)