Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L23
         (1186 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.91 
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    31   1.2  
U41535-2|AAB63402.1|  731|Caenorhabditis elegans Hypothetical pr...    31   2.1  
U41535-1|AAK67247.1|  734|Caenorhabditis elegans Hypothetical pr...    31   2.1  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 601 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 723
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = -2

Query: 894 NPVNQWLLPVAISRV-LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSY 718
           NP+ +   P A+  V   G++    +R RR     +    H  AW+ R  P    ++ + 
Sbjct: 59  NPLGEQRTPQAVRSVPKDGYSL---FRYRRMVFGAKDQLKHDKAWNNRSLPQKSRWNQAS 115

Query: 717 EKAPRFPKGERRTGIR*AAGSEQESARGSFQGETPGIF 604
            K  ++ K E + G     G+E+       +G+T   F
Sbjct: 116 VKLAQYQKAEEKMGFIKVFGTEEFQNYSKRRGQTRNSF 153


>U41535-2|AAB63402.1|  731|Caenorhabditis elegans Hypothetical
           protein F18A1.6a protein.
          Length = 731

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -1

Query: 283 NLPHLPLNLKHKMNAIVVVNLFIAAYNGYK*SNSXTNXTNK-AFFSLH-DELWFVQTHQW 110
           N PH    L+HKM      +L +AA+     + S +  T   +F   H  + W++  H W
Sbjct: 361 NAPHSRCPLQHKMIVSPSRHLLVAAFIFSVQTKSGSTITYAISFLMSHLKQEWYLDRHSW 420

Query: 109 S*XMDGSNEPXXK 71
              M G + P  K
Sbjct: 421 FERMVGDSVPKMK 433


>U41535-1|AAK67247.1|  734|Caenorhabditis elegans Hypothetical
           protein F18A1.6b protein.
          Length = 734

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -1

Query: 283 NLPHLPLNLKHKMNAIVVVNLFIAAYNGYK*SNSXTNXTNK-AFFSLH-DELWFVQTHQW 110
           N PH    L+HKM      +L +AA+     + S +  T   +F   H  + W++  H W
Sbjct: 364 NAPHSRCPLQHKMIVSPSRHLLVAAFIFSVQTKSGSTITYAISFLMSHLKQEWYLDRHSW 423

Query: 109 S*XMDGSNEPXXK 71
              M G + P  K
Sbjct: 424 FERMVGDSVPKMK 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,174,788
Number of Sequences: 27780
Number of extensions: 512425
Number of successful extensions: 1259
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)