Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L22
         (1179 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         32   1.0  
01_01_0238 - 1976645-1977561,1977649-1977909,1978243-1978275,198...    31   2.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.1  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    29   7.1  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
 Frame = -2

Query: 1157 PVFXXXPXGXPXSPXGXXXPPPXRRPG--PXXXXXGXRXAPKTQPPSPRGXP 1008
            PV    P   P  P     PPP R P   P       +  P  QPPSP   P
Sbjct: 143  PVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPP 194


>01_01_0238 -
           1976645-1977561,1977649-1977909,1978243-1978275,
           1980556-1981345
          Length = 666

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
 Frame = -3

Query: 439 RNSLFFISLDGIIYESNSILLKSEYSYLQYH*CPI-DFSVISGL------LSSSNKY 290
           R+ LF +  D I YE+NS++   E ++     CP+ DF+V S L      +S++NKY
Sbjct: 80  RDHLFRV--DSIFYENNSLVAAVETTFAGDADCPVPDFNVTSSLSPYPFIISNTNKY 134


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -2

Query: 1127 PXSPXGXXXPPPXRRPGPXXXXXGXRXAPKTQPPSPRGXP 1008
            P  P G   PPP + P P     G    P   P   +G P
Sbjct: 338  PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP 377


>04_04_0233 + 23801944-23802598,23802914-23803047,23803548-23803730,
            23804145-23804318
          Length = 381

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 1159 PXFSXXPRXGXPXPPXXXXPLPPP 1088
            P FS  PR   P PP    P PPP
Sbjct: 16   PPFSSRPRVVGPPPPPPSDPPPPP 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,033,540
Number of Sequences: 37544
Number of extensions: 289219
Number of successful extensions: 1109
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3608253564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)