Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L20
         (1231 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.16 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   6.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.9 bits (64), Expect = 0.16
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 624 AGPSPNRHTGSPNCRKLLLTSSSSVDT 544
           A PSP+ H  SP+   L LTSS S  T
Sbjct: 715 ASPSPHHHLTSPHGAPLALTSSKSAST 741


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
            chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 1088 GRPGSRCQGGPWAPGRGGQSG 1026
            G PG   +G P APG  G+ G
Sbjct: 533  GTPGDAKEGRPGAPGLPGRDG 553


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 960,270
Number of Sequences: 2352
Number of extensions: 16818
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)