Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L19
(1311 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 184 5e-45
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 119 1e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 3e-16
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 72 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 63 1e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 55 4e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 52 3e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 49 3e-04
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 47 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.58
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 38 0.76
UniRef50_Q6K5T1 Cluster: Cell wall protein-like; n=1; Oryza sati... 36 1.8
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 36 2.3
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 5.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 184 bits (448), Expect = 5e-45
Identities = 86/106 (81%), Positives = 88/106 (83%)
Frame = +1
Query: 556 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQXXGGETRQDYKXTRRFPLEXPSCALLFRP 735
SK+ T R RFSIGSAPLTSITKIDAQ GGETRQDYK TRRFPLE PSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 736 CRLPDTCPPFSLREAWRFLIAHXVGISLRCRSXXPXWAVXTNPPXS 873
CRLPDTCPPFSLREAWRFLIAH VGIS+RCRS P WAV TNPP S
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS 107
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 119 bits (287), Expect = 1e-25
Identities = 70/116 (60%), Positives = 73/116 (62%)
Frame = +1
Query: 400 VCXLGALPLPRSLTRCARSFGCGERYXLTQRRXYGYPXNQGITQEXTCEQKASKRPGTVK 579
+C G +PLPRSLTR ARSFGCGERY LT G E T + SK
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE---I 77
Query: 580 RPRCWRFSIGSAPLTSITKIDAQXXGGETRQDYKXTRRFPLEXPSCALLFRPCRLP 747
RPR RFSIGSAPLTSI K DAQ GGETRQDYK RRFPL PSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 88.6 bits (210), Expect = 3e-16
Identities = 43/54 (79%), Positives = 44/54 (81%)
Frame = +1
Query: 574 VKRPRCWRFSIGSAPLTSITKIDAQXXGGETRQDYKXTRRFPLEXPSCALLFRP 735
V+ PR RFSIGSAPLTSITK DAQ GGETRQDYK TRRFPL PSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 72.1 bits (169), Expect = 3e-11
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 714 VRSPVPTLPLTGYLSAFLPSGSVALSHSXXCRYLTSV 824
+RSPVPTLPLTGYLSAFLPSGSVALSHS CRYL+SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 63.3 bits (147), Expect = 1e-08
Identities = 30/43 (69%), Positives = 30/43 (69%)
Frame = -1
Query: 564 PFAGLLLTCXFLRYPLIXWITVXPPLSEXIPLAAAERPSAASQ 436
P LLTC F YPLI WITV PPLSE PLAA ERPS ASQ
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 55.2 bits (127), Expect = 4e-06
Identities = 34/105 (32%), Positives = 46/105 (43%)
Frame = +1
Query: 421 PLPRSLTRCARSFGCGERYXLTQRRXYGYPXNQGITQEXTCEQKASKRPGTVKRPRCWRF 600
PLP C C L + +P N I + + + + P T F
Sbjct: 14 PLPNKTRYCCHRQQC----LLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLF 69
Query: 601 SIGSAPLTSITKIDAQXXGGETRQDYKXTRRFPLEXPSCALLFRP 735
S PLT+ITKI Q +T+ +YK T FPL+ PS +LLF P
Sbjct: 70 PYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 52.0 bits (119), Expect = 3e-05
Identities = 29/57 (50%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 364 CINESANARGXAVCXLGALPLPRSLTRCARSFGCGERYXL-TQRRXYGYPXNQGITQ 531
CI + A AR AV L ALPL RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 48.8 bits (111), Expect = 3e-04
Identities = 29/72 (40%), Positives = 31/72 (43%)
Frame = +1
Query: 658 GETRQDYKXTRRFPLEXPSCALLFRPCRLPDTCPPFSLREAWRFLIAHXVGISLRCRSXX 837
GETRQD K P P PPFSL + + GIS RCRS
Sbjct: 26 GETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFA 85
Query: 838 PXWAVXTNPPXS 873
P WAV NPP S
Sbjct: 86 PSWAVSKNPPFS 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 47.2 bits (107), Expect = 0.001
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -1
Query: 852 HSPGWXXRPTPK*DTYXVXYEKAPRFPKGER 760
+SP W RP P DT V YEKAPRFPKG++
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
Score = 46.0 bits (104), Expect = 0.002
Identities = 30/87 (34%), Positives = 40/87 (45%)
Frame = -2
Query: 914 QDDSYRIRXQRSGXEXGGXVHTAQXGXXDLHRSEIPTXXAMRKRHASRREKGGQVSGKRQ 735
QDDSYR + + S E G ++ + + + + +K QVSGKRQ
Sbjct: 12 QDDSYR-KGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQ 70
Query: 734 GRNRRAHEGXSRGKRLVXL*SCRVSPP 654
GRNRRAHEG + K L PP
Sbjct: 71 GRNRRAHEGAAGEKSPASLSPVGFRPP 97
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.9 bits (84), Expect = 0.58
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2
Query: 167 DPDMIRYIDEXGQTTTXM 220
DPDMIRYIDE GQTTT M
Sbjct: 346 DPDMIRYIDEFGQTTTRM 363
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 37.5 bits (83), Expect = 0.76
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 483 HSKAXIRLSTXSGDNAGXNM 542
HSKA IRLST SGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q6K5T1 Cluster: Cell wall protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Cell wall protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 338
Score = 36.3 bits (80), Expect = 1.8
Identities = 40/138 (28%), Positives = 49/138 (35%)
Frame = +3
Query: 588 LLAFFHRLRPPDXHHKNRRSXXRWRNPTGL*XYQAFPPGXXLVRSPVPTLPLTGYLSAFL 767
L A F PP + S +W NP G + +F P L RSPV PL+ L
Sbjct: 19 LPAVFPVAVPPSPMPGSLSSPIKW-NPLGT--FSSFSP---LPRSPVAAPPLSTVL-LLS 71
Query: 768 PSGSVALSHSXXCRYLTSV*VVXSXLGCVXXPPXFXPRPLXPYPVTIVLXSXPG*NTIXP 947
P+ A SH S V S P P PL T+ + G T P
Sbjct: 72 PTPPAASSHPYRLACAPSGRAVTSLGSATPSPSPASPSPLPKLAGTVSSSTSSGVATTPP 131
Query: 948 PLATXPLVXGLSKPRFFR 1001
P A + P F R
Sbjct: 132 PPAACATSQATASPEFRR 149
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 35.9 bits (79), Expect = 2.3
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2
Query: 434 ERGSGXAPNXQTAXPRALADSLMQ 363
+R + APN QTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 5.4
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 794 MRKRHASRREKGGQVSGKRQGRNRRAHEGXSRGKR 690
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,311,958
Number of Sequences: 1657284
Number of extensions: 13649876
Number of successful extensions: 28089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26971
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 134843940747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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