Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L18
(1212 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical ... 94 6e-22
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 30 2.9
Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 29 8.7
AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical... 29 8.7
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 29 8.7
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 29 8.7
>AC024856-1|ABB51172.1| 334|Caenorhabditis elegans Hypothetical
protein Y71G10AR.4 protein.
Length = 334
Score = 93.9 bits (223), Expect(2) = 6e-22
Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +1
Query: 565 VVITRVERVIDTIFTTSVAVFIALIFINFGCAMHWPTVRDVIKRPIGPAIGMVGQFLFMP 744
VV ++ R + F SV V I++ + GC + V +K+P+ P IG+ QF+ MP
Sbjct: 171 VVRSKESRRLTVYFVISVVVLISMANVMMGCELDIDAVLATLKKPVAPGIGLFAQFIIMP 230
Query: 745 LSSFGLGYVIF-PNS-PAMRLGMFFTGVAPGGGASKRVDLHSRRXLNLSLAMTTISTICS 918
L S+ + Y IF P +M LG+F TG +PGGGAS L LNLS+ MT ISTICS
Sbjct: 231 LLSYLIAYAIFMPRGLYSMALGLFVTGCSPGGGASNFWTLLLDGNLNLSVTMTFISTICS 290
Query: 919 FGLCP 933
+ P
Sbjct: 291 LVMMP 295
Score = 29.1 bits (62), Expect(2) = 6e-22
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Frame = +1
Query: 202 PLHLIVLYVLALCPLWVICQXVPRLTAVFSPPSIIVKMDEYKYVDVSI---------EGS 354
P+ LI+ +L L V + +T +SP SI ++EY DV++ E
Sbjct: 10 PMVLIIRLLLQLSST-VSAELSRSMTLTYSPQSIH-DLEEYGSTDVNVTLKFPKNEFETE 67
Query: 355 GLELNDAFKISSQNEQLAWAEWNSSNL----YEKHDSTWKGK--IRINGNFIGRTNLVLE 516
+E + A ++S + + A A++N+ L + + ++ + I INGN +G+T + +
Sbjct: 68 NIE-HYALSVNSFHPETATADYNTEKLKTEQFRLNGQFYETETIITINGNLLGKTAMKMR 126
Query: 517 VKRDADTFSVT 549
+ A+ ++ T
Sbjct: 127 LVPAAEYYNET 137
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical protein
F15A2.6b protein.
Length = 835
Score = 30.3 bits (65), Expect = 2.9
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 1008 SKRCARTAPRSWRCGTPLDPXXTTTRA*TK*ANSRYGRH---GEGQVEXPPRMKVHTFGG 838
S R +R S G+P++P T R N + GRH G E P FG
Sbjct: 400 SSRTSRYPMGSIADGSPINPRKTYGR------NQKSGRHSSLGGSPTESPRSSTRDLFGS 453
Query: 837 AAPGGYAREEHPETHRGRVREYHVAQTEGTEWHKKELSDHSYGGSDRSLDDVTHRR 670
++ G Y+ + RGR T ++ + + + + R + D RR
Sbjct: 454 SSSGSYSARAGEDRDRGRSAS---RSTNSYHYYTQPVDPQTLAEAARHVRDAQERR 506
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical protein
F15A2.6a protein.
Length = 914
Score = 30.3 bits (65), Expect = 2.9
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 1008 SKRCARTAPRSWRCGTPLDPXXTTTRA*TK*ANSRYGRH---GEGQVEXPPRMKVHTFGG 838
S R +R S G+P++P T R N + GRH G E P FG
Sbjct: 400 SSRTSRYPMGSIADGSPINPRKTYGR------NQKSGRHSSLGGSPTESPRSSTRDLFGS 453
Query: 837 AAPGGYAREEHPETHRGRVREYHVAQTEGTEWHKKELSDHSYGGSDRSLDDVTHRR 670
++ G Y+ + RGR T ++ + + + + R + D RR
Sbjct: 454 SSSGSYSARAGEDRDRGRSAS---RSTNSYHYYTQPVDPQTLAEAARHVRDAQERR 506
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 30.3 bits (65), Expect = 2.9
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Frame = -1
Query: 1008 SKRCARTAPRSWRCGTPLDPXXTTTRA*TK*ANSRYGRH---GEGQVEXPPRMKVHTFGG 838
S R +R S G+P++P T R N + GRH G E P FG
Sbjct: 400 SSRTSRYPMGSIADGSPINPRKTYGR------NQKSGRHSSLGGSPTESPRSSTRDLFGS 453
Query: 837 AAPGGYAREEHPETHRGRVREYHVAQTEGTEWHKKELSDHSYGGSDRSLDDVTHRR 670
++ G Y+ + RGR T ++ + + + + R + D RR
Sbjct: 454 SSSGSYSARAGEDRDRGRSAS---RSTNSYHYYTQPVDPQTLAEAARHVRDAQERR 506
>Z82269-8|CAJ76946.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 111 KDENWKWRDESGRLLDEKHNNTWKGEL 137
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 544 KDENWKWRDESGRLLDEKHNNTWKGEL 570
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 559 KDENWKWRDESGRLLDEKHNNTWKGEL 585
>AL021487-16|CAJ76947.1| 185|Caenorhabditis elegans Hypothetical
protein Y45F10B.13c protein.
Length = 185
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 111 KDENWKWRDESGRLLDEKHNNTWKGEL 137
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 544 KDENWKWRDESGRLLDEKHNNTWKGEL 570
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 391 QNEQLAWAEWNSSNLYEKHDSTWKGKI 471
++E W + + L EKH++TWKG++
Sbjct: 559 KDENWKWRDESGRLLDEKHNNTWKGEL 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,453,669
Number of Sequences: 27780
Number of extensions: 527609
Number of successful extensions: 1431
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3339026560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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