Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L18
(1212 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 1.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 4.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 5.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 5.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 9.4
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 9.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 9.4
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 24.6 bits (51), Expect = 1.8
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 295 PSIIVK-MDEYKYVDVSIEGSGLELNDAFKISSQNEQ 402
PS++V +Y Y+D +E + L+L ISS Q
Sbjct: 286 PSVVVSDYSDYSYLDEKLERNDLDLEKYEGISSTPSQ 322
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 620 ATLVVNIVSMTRSTLVITTGTV-PLVTENVSAS 525
AT + I + T +T TT T P T+N SA+
Sbjct: 655 ATTITTITTTTTTTTTTTTTTTTPNTTQNASAT 687
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 989 RHHDLGVVXHHLTQXXXPRGHKPNEQ 912
RHH L HHL H+P +Q
Sbjct: 140 RHHHLQNHHHHLQSTAVQDHHRPYQQ 165
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 358 LELNDAFKISSQNEQLAWAEWNSSNLYEKHDSTWKGKIR 474
LE + K S++ + + + N Y K+ TWK + R
Sbjct: 30 LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 358 LELNDAFKISSQNEQLAWAEWNSSNLYEKHDSTWKGKIR 474
LE + K S++ + + + N Y K+ TWK + R
Sbjct: 30 LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 358 LELNDAFKISSQNEQLAWAEWNSSNLYEKHDSTWKGKIR 474
LE + K S++ + + + N Y K+ TWK + R
Sbjct: 30 LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 358 LELNDAFKISSQNEQLAWAEWNSSNLYEKHDSTWKGKIR 474
LE + K S++ + + + N Y K+ TWK + R
Sbjct: 30 LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 783 LARDASRDVLHGRSPRGRRLQTCGPSFSAVXQPVPRHDD 899
++R+++R G GRR T G S A+ QP+ + D
Sbjct: 34 ISRNSNRSESSGYC--GRRPSTFGSSNEALPQPISKRKD 70
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.4 bits (48), Expect = 4.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 783 LARDASRDVLHGRSPRGRRLQTCGPSFSAVXQPVPRHDD 899
++R+++R G GRR T G S A+ QP+ + D
Sbjct: 34 ISRNSNRSESSGYC--GRRPSTFGSSNEALPQPISKRKD 70
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 784 SPAMRLGMFFTGVAPGGGASKRVDLHS 864
+PA+ + G A GGGA VD H+
Sbjct: 587 TPAVGVAAASAGGAGGGGARSYVDPHT 613
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -1
Query: 630 YEHSNAGGEYRVYDPFDPRDHHGNRTVG 547
+ H + +Y + P HGN T+G
Sbjct: 317 HPHQHHPSQYHPHRGSSPHHQHGNHTMG 344
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/56 (19%), Positives = 31/56 (55%)
Frame = +1
Query: 385 SSQNEQLAWAEWNSSNLYEKHDSTWKGKIRINGNFIGRTNLVLEVKRDADTFSVTN 552
+++NE + ++ ++++EK +++ + R G + +++R+A TF T+
Sbjct: 378 NNENEGTYFILYDFNDIFEKDQASFLERERFLGIINNIFKNMSQIEREAITFQYTD 433
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 22.2 bits (45), Expect = 9.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 540 FRHQRYGSRGDHEGRTGHRHDIHHQR 617
F Q G+RG+H G +DI ++R
Sbjct: 303 FNLQVRGTRGEHTEAEGGIYDISNKR 328
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/56 (19%), Positives = 31/56 (55%)
Frame = +1
Query: 385 SSQNEQLAWAEWNSSNLYEKHDSTWKGKIRINGNFIGRTNLVLEVKRDADTFSVTN 552
+++NE + ++ ++++EK +++ + R G + +++R+A TF T+
Sbjct: 378 NNENEGTYFILYDFNDIFEKDQASFLERERFLGIINNIFKNMSQIEREAITFQYTD 433
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,545
Number of Sequences: 438
Number of extensions: 7033
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41452344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -