Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L17
         (1203 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.37 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.65 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   8.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 442 GDTSNIVLLGPNLDLSLGNIL*HNLVEVSSCEL 344
           GD S I  L PNLD++ GN+   N +++ +  L
Sbjct: 60  GDDSRIKHLEPNLDVNQGNLKKFNALKLKNPNL 92


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 816 CAAGSPTCWTRVMRTCCSK 872
           C  G PTCW    +  C K
Sbjct: 878 CENGKPTCWRECDKATCEK 896


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 437 VTLPIFESYQDGSDTYEL 490
           VT+  F SYQ G+ TY L
Sbjct: 160 VTIIFFASYQYGTKTYSL 177


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 437 VTLPIFESYQDGSDTYEL 490
           VT+  F SYQ G+ TY L
Sbjct: 160 VTIIFFASYQYGTKTYSL 177


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = -1

Query: 393 LVTF-CSTTWLKSP 355
           LV F CST WLK P
Sbjct: 306 LVNFDCSTMWLKDP 319


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 676  CTFQPGN--DYVLNGVDTSIRDLNNLVES 596
            CT++  N  +  L  +  S+RDLN  +ES
Sbjct: 1090 CTYKADNKENEQLRKIQESLRDLNRKIES 1118


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 676  CTFQPGN--DYVLNGVDTSIRDLNNLVES 596
            CT++  N  +  L  +  S+RDLN  +ES
Sbjct: 1090 CTYKADNKENEQLRKIQESLRDLNRKIES 1118


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 615 LITSSRVTNEVCSDANSTK 559
           L   +++  ++C +ANSTK
Sbjct: 303 LFILAKIVTDLCQEANSTK 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,097
Number of Sequences: 336
Number of extensions: 4713
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35041501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)