Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L17
         (1203 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    28   0.62 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    27   1.4  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    26   1.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   4.4  

>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 0.62
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 396 LKSRLGPRRTMLLVSPSQSLSHTRMVLIPMSWLVW 500
           L+++ G RRT L++ P  SL H R   I    L+W
Sbjct: 82  LRTQRGYRRTRLVLPPWSSLVHWRSGNIDQQQLLW 116


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 219 PWPFTAPARRPLINIWAPREGKIAN 145
           PWP  +P   P+ N+W+  + ++ N
Sbjct: 259 PWPALSPDLNPIENLWSTLKRQLKN 283


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 219 PWPFTAPARRPLINIWAPREGKIAN 145
           PWP  +P   P+ N+W+  +  + N
Sbjct: 187 PWPALSPDLNPIENLWSTLKRHVKN 211


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 517 ACKAQEELPERCEAFGRVSVTADFICHSRRGY*D 618
           AC  + E P++C  +   S +++ +  SR GY D
Sbjct: 751 ACDCKMECPKQCTCYHDQSWSSNVVDCSRAGYDD 784


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,007,846
Number of Sequences: 2352
Number of extensions: 18875
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 136521498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)