Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L17
(1203 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-1|CAA81600.1| 257|Caenorhabditis elegans Hypothetical pr... 299 2e-81
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 29 6.6
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 29 8.7
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 29 8.7
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 29 8.7
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 8.7
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 29 8.7
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 29 8.7
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 29 8.7
>Z27080-1|CAA81600.1| 257|Caenorhabditis elegans Hypothetical
protein F55H2.2 protein.
Length = 257
Score = 299 bits (734), Expect = 2e-81
Identities = 139/199 (69%), Positives = 169/199 (84%)
Frame = +2
Query: 134 GKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVM 313
GKDR+A+FPSR AQ L+K RL GA KGH LLKKKADAL +RFR IL KI+E K LMGEVM
Sbjct: 5 GKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVM 64
Query: 314 KEAAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELA 493
KEAAFSLAEAKFT GDF+ V+QNV++AQ ++R KK+NV GV LP+F++YQDG D Y+L
Sbjct: 65 KEAAFSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVFLPVFDAYQDGPDAYDLT 124
Query: 494 GLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLER 673
GL +GG +A+LKKN+ A++LLVELA+LQT F+TLDE IK+TNRRVNAIEHVIIPR+E
Sbjct: 125 GLGKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIEN 184
Query: 674 TLAYIISELDELEREEFYR 730
TL YI++ELDE+EREEF+R
Sbjct: 185 TLTYIVTELDEMEREEFFR 203
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 38.3 bits (85), Expect = 0.011
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 392 KAQIKIRSKKDNVAGVTLPIFES---YQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLL 562
K IKI + ++ + +FE+ +D + ELA L G Q+L K+KK+F++
Sbjct: 21 KKPIKIEGRSGDLKQLKSALFENKGPVKDEAREEELAALKAGNQELKKMKKDFETGAVHN 80
Query: 563 VELASLQTSFVTLDEVIKIT 622
+E +T L+E K+T
Sbjct: 81 IENEDDETKIARLEERQKLT 100
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 29.1 bits (62), Expect = 6.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 657 MITCSMALTRLFVILITSSRVTNEVCSDANSTKSFTALWKFFLSF 523
+ITCS + +F++++ +T+ S+A ++ WK F F
Sbjct: 103 IITCSQLILYVFLLIVIPIFLTDYFASEAQRYMNYPHEWKVFKDF 147
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 985 FHFIHGTKCTRTVLFILVFXXRSAAVYKQAMYGVLSMDLEQQVLITLVQQVGDP 824
F+F C R +L + V+ S K+ + G ++ + ++L Q VGDP
Sbjct: 339 FYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPV-SRILKKASQVVGDP 391
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 985 FHFIHGTKCTRTVLFILVFXXRSAAVYKQAMYGVLSMDLEQQVLITLVQQVGDP 824
F+F C R +L + V+ S K+ + G ++ + ++L Q VGDP
Sbjct: 376 FYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPV-SRILKKASQVVGDP 428
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 161 SRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE 319
++G Q G LA K GL K++ + + F ++ K + TLM +KE
Sbjct: 87 NKGDQAANFGNLAQGAKAEGLTKEQQEDAKRAFLNVVCKAQDVSTLMPNDLKE 139
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 161 SRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE 319
++G Q G LA K GL K++ + + F ++ K + TLM +KE
Sbjct: 191 NKGDQAANFGNLAQGAKAEGLTKEQQEDAKRAFLNVVCKAQDVSTLMPNDLKE 243
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 985 FHFIHGTKCTRTVLFILVFXXRSAAVYKQAMYGVLSMDLEQQVLITLVQQVGDP 824
F+F C R +L + V+ S K+ + G ++ + ++L Q VGDP
Sbjct: 376 FYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPV-SRILKKASQVVGDP 428
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 413 SKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAVKLLVELAS 577
SK+D V P ++ S Y+ + +RGG LA+ ++ +S +L+ AS
Sbjct: 980 SKRDFVQSSNTPTTTTHSSSSHRYQHSNSSRGGTPLAQRLRDERSGQVVLLSRAS 1034
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 985 FHFIHGTKCTRTVLFILVFXXRSAAVYKQAMYGVLSMDLEQQVLITLVQQVGDP 824
F+F C R +L + V+ S K+ + G ++ + ++L Q VGDP
Sbjct: 339 FYFTFSENCVRDLLIVTVYEMDSNNAEKKRILGCMTFPV-SRILKKASQVVGDP 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,984,391
Number of Sequences: 27780
Number of extensions: 418808
Number of successful extensions: 975
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3307723186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -