Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L15
         (1236 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   185   2e-45
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...   100   7e-20
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    80   1e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    62   2e-08
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    54   6e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    52   4e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    51   5e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    49   3e-04
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ...    49   3e-04
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    44   0.011
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4...    42   0.043
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    37   0.93 
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2...    37   1.2  
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ...    34   6.6  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  185 bits (450), Expect = 2e-45
 Identities = 86/107 (80%), Positives = 87/107 (81%)
 Frame = +3

Query: 567 SKRPXTVKRPXCWRFXIGXAPLTSITKIDAQXXGGXTRQDYKXTRRFPLEAPSCXLLFRP 746
           SK+  T       RF IG APLTSITKIDAQ  GG TRQDYK TRRFPLEAPSC LLFRP
Sbjct: 2   SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61

Query: 747 CRLPDTCPPFSLREAWXFLIAHAVGISVRCRSXAPSWAVCTNPPXQP 887
           CRLPDTCPPFSLREAW FLIAHAVGISVRCRS APSWAVCTNPP  P
Sbjct: 62  CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score =  100 bits (240), Expect = 7e-20
 Identities = 62/112 (55%), Positives = 65/112 (58%)
 Frame = +3

Query: 423 GALPXPRSLTRCARSXGCGXRYQLTQRX*YGYPXNQGITQEXTCXQKASKRPXTVKRPXC 602
           G +P PRSLTR ARS GCG RY+LT           G   E T  +  SK      RP  
Sbjct: 34  GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEI---RPRR 81

Query: 603 WRFXIGXAPLTSITKIDAQXXGGXTRQDYKXTRRFPLEAPSCXLLFRPCRLP 758
            RF IG APLTSI K DAQ  GG TRQDYK  RRFPL APSC LLF P  LP
Sbjct: 82  SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 79.8 bits (188), Expect = 1e-13
 Identities = 39/54 (72%), Positives = 40/54 (74%)
 Frame = +3

Query: 585 VKRPXCWRFXIGXAPLTSITKIDAQXXGGXTRQDYKXTRRFPLEAPSCXLLFRP 746
           V+ P   RF IG APLTSITK DAQ  GG TRQDYK TRRFPL APSC LLF P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 62.5 bits (145), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 878 RGVXAHSPAWSXRPTPN*DTYSVSYEKAPRFPKGER 771
           RGV A+SPAWS RP P+ DT SVSYEKAPRFPKG++
Sbjct: 26  RGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61



 Score = 38.7 bits (86), Expect = 0.31
 Identities = 20/38 (52%), Positives = 22/38 (57%)
 Frame = -3

Query: 778 EKGGQVSGKRQGRNRXXHEGASRGKRLVXL*SCRVXPP 665
           +K  QVSGKRQGRNR  HEGA+  K    L      PP
Sbjct: 60  KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPP 97



 Score = 34.3 bits (75), Expect = 6.6
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
 Frame = -1

Query: 933 PGWXXDDSYRIRXXGRAEXGGXCTQPSLERTTYTELRYLQREL*ESXTLPEGRKADRYPV 754
           PGW  DDSYR     RAE G     P+                 ++   P+G+KA++  V
Sbjct: 8   PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ--V 65

Query: 753 SG-RVGTGXXT-RXLPGGNAWYXYSPVGF 673
           SG R G          G  +    SPVGF
Sbjct: 66  SGKRQGRNRRAHEGAAGEKSPASLSPVGF 94


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 54.4 bits (125), Expect = 6e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +2

Query: 758 GYLSAFLPSGSVXLSHSSRCRYLSSV 835
           GYLSAFLPSGSV LSHSSRCRYLSSV
Sbjct: 12  GYLSAFLPSGSVALSHSSRCRYLSSV 37


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 51.6 bits (118), Expect = 4e-05
 Identities = 30/73 (41%), Positives = 32/73 (43%)
 Frame = +3

Query: 669 GXTRQDYKXTRRFPLEAPSCXLLFRPCRLPDTCPPFSLREAWXFLIAHAVGISVRCRSXA 848
           G TRQD K         P       P       PPFSL  +     +   GIS RCRS A
Sbjct: 26  GETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFA 85

Query: 849 PSWAVCTNPPXQP 887
           PSWAV  NPP  P
Sbjct: 86  PSWAVSKNPPFSP 98



 Score = 41.1 bits (92), Expect = 0.057
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +1

Query: 703 VSPWKXPRAXSCSDPAAYRIPVRLSPFGKRGAFS*LTL*VSQFGVGRXLQA----GLCAX 870
           VS    P A SCS+PA  RIPV   PF   G+ +      S  G+    ++       + 
Sbjct: 37  VSDESLPLALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGISARCRSFAPSWAVSK 92

Query: 871 TPRFSPTXXPYPVTIVXXPXR 933
            P FSPT  PYPVT+   P R
Sbjct: 93  NPPFSPTAAPYPVTVHLSPTR 113


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 51.2 bits (117), Expect = 5e-05
 Identities = 32/105 (30%), Positives = 43/105 (40%)
 Frame = +3

Query: 432 PXPRSLTRCARSXGCGXRYQLTQRX*YGYPXNQGITQEXTCXQKASKRPXTVKRPXCWRF 611
           P P     C     C     L +     +P N  I  +    + + + P T        F
Sbjct: 14  PLPNKTRYCCHRQQC----LLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLF 69

Query: 612 XIGXAPLTSITKIDAQXXGGXTRQDYKXTRRFPLEAPSCXLLFRP 746
                PLT+ITKI  Q     T+ +YK T  FPL++PS  LLF P
Sbjct: 70  PYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 48.8 bits (111), Expect = 3e-04
 Identities = 22/32 (68%), Positives = 22/32 (68%)
 Frame = -2

Query: 575 PFAGLLXTCXFLXYPLIXWITVLPPLSELIPL 480
           P    L TC F  YPLI WITVLPPLSEL PL
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50


>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
            cellular organisms|Rep: Uncharacterized 9.4 kDa protein -
            Escherichia coli
          Length = 84

 Score = 48.8 bits (111), Expect = 3e-04
 Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 873  PPXQPDRXXLSGNYRLXSXPVXXXLSPLAXXLVTGLXXXGXXRG-*KFLXWGPXXGXLKK 1049
            PP QPDR  LSGNYRL S PV   LSPLA      +       G  +FL W P  G  ++
Sbjct: 4    PPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRR 63


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 43.6 bits (98), Expect = 0.011
 Identities = 25/57 (43%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 375 CXNESANARGXAVXXXGALPXPRSLTRCARSXGCGXRYQL-TQRX*YGYPXNQGITQ 542
           C  + A AR  AV    ALP  RS TRC RS GCG      +    YG P  QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
           Bacteria|Rep: Putative uncharacterized protein 1 -
           Escherichia coli
          Length = 42

 Score = 41.5 bits (93), Expect = 0.043
 Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 954 VAIXXXLPGWXXDDSYRIRXXGRAEXGGXCTQPS-LERTT 838
           +A+   LPGW  DDSYRIR  GRAE G     P+  ER T
Sbjct: 1   MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40



 Score = 38.3 bits (85), Expect = 0.40
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -2

Query: 878 RGVXAHSPAWSXRPTPN 828
           RGV AHSPAWS RPTPN
Sbjct: 26  RGVRAHSPAWSERPTPN 42


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 37.1 bits (82), Expect = 0.93
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +2

Query: 491 AHSKXVIRLSTXSGDNXGXNM 553
           AHSK VIRLST SGDN G NM
Sbjct: 39  AHSKAVIRLSTESGDNAGKNM 59


>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           1 - Escherichia coli
          Length = 47

 Score = 36.7 bits (81), Expect = 1.2
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 878 RGVXAHSPAWSXRPTPN*DT 819
           RGV A+SPAWS RPTP+ DT
Sbjct: 26  RGVLAYSPAWSERPTPSRDT 45


>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
           Edwardsiella tarda|Rep: Putative uncharacterized protein
           - Edwardsiella tarda
          Length = 99

 Score = 34.3 bits (75), Expect = 6.6
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 850 QAGLCAXTPRFSPTXXPYPVTIVXXPXR*XXXYRHW 957
           QAG C  +P FSPT  P  VT++  P       RHW
Sbjct: 64  QAGFCTNSP-FSPTITPVQVTVLLNPTLTDTQKRHW 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,624,451
Number of Sequences: 1657284
Number of extensions: 9496532
Number of successful extensions: 13354
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13345
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124720521772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)