BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L14
(1260 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 28 0.66
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 28 0.66
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 2.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 4.7
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 25 4.7
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 8.1
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 27.9 bits (59), Expect = 0.66
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 238 FRYGRHVSITCDIRYFVYYYFNEALLKVIYLSLISCARF 122
F H +IT + Y+YF E + ++IY L+ C +
Sbjct: 183 FHLEGHPNITGYQQCVTYHYFEEEIYQIIYNVLVMCLMY 221
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 27.9 bits (59), Expect = 0.66
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 238 FRYGRHVSITCDIRYFVYYYFNEALLKVIYLSLISCARF 122
F H +IT + Y+YF E + ++IY L+ C +
Sbjct: 183 FHLEGHPNITGYQQCVTYHYFEEEIYQIIYNVLVMCLMY 221
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 26.2 bits (55), Expect = 2.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 524 HHHPHVPRHRLQPHFLPQRAGP 589
HHH H P H Q H R P
Sbjct: 186 HHHHHHPHHSQQQHSASPRCYP 207
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.0 bits (52), Expect = 4.7
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 215 RDVTAVSKISHRLNVKIYGVALKPWCRV*LIDILNDNMDSI 337
RD T ++ +++ ++G K W LID+ D D +
Sbjct: 265 RDNTHYRAVAQSMSLAVFGRERKVWNSASLIDVDRDGKDEL 305
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 25.0 bits (52), Expect = 4.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 455 PHPGLRYVYRIVLHRDSRYRHRTVYTKNHTNSTIFSECT*LNP 327
P+P + V +L+RD R+R Y + N ++ + T NP
Sbjct: 147 PNPYVSDVDNPLLYRDGGDRNRNRYVSDVENPLLYRDRTPYNP 189
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 8.1
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 215 RDVTAVSKISHRLNVKIYGVALKPWCRV*LIDILNDNMDSI 337
RD T ++ ++ ++G K W LID+ D D +
Sbjct: 265 RDNTHYRAVAQSTSLAVFGRGKKVWNSASLIDVDRDGKDEL 305
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,300
Number of Sequences: 2352
Number of extensions: 12522
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144287691
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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