Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L11
         (1210 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   6.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   6.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   8.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 270 HLLKRNHVFRLQRWDSCFTIQMRFFLLLRWVDELTAH 160
           HL  +  +   +RW  C  +       L+  DEL+AH
Sbjct: 657 HLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAH 693


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 270 HLLKRNHVFRLQRWDSCFTIQMRFFLLLRWVDELTAH 160
           HL  +  +   +RW  C  +       L+  DEL+AH
Sbjct: 657 HLKDKKKIRAKKRWSQCMYMYFLLGFRLQANDELSAH 693


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 589 YILFYNKYLFKLCFFITQTFYFY 657
           ++LFY  ++     F+  T+YFY
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFY 104


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 264 VDVNRIVV*KLGTTIHPTTRL 326
           +D++   V   GTT HPT++L
Sbjct: 30  IDLSTFRVPTYGTTSHPTSKL 50


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 264 VDVNRIVV*KLGTTIHPTTRL 326
           +D++   V   GTT HPT++L
Sbjct: 30  IDLSTFRVPTYGTTSHPTSKL 50


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = +3

Query: 300 TTIHPTTRLFFYSLFCISFFTPSVQVVACGHV----LGTYIFLYNSSRNIQIL---FSVS 458
           T I  T  LFF  L  ISFF     ++ C +     L  +I LY  S+  Q++   F   
Sbjct: 130 TQIFITCELFFVILLWISFFLNF--MLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAF 187

Query: 459 VGTIKHK 479
           V  +K K
Sbjct: 188 VVVLKQK 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,946
Number of Sequences: 336
Number of extensions: 5566
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35247023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)