Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L11
         (1210 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    26   1.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.4  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
 Frame = +2

Query: 659 DMFDK-YICSHRCLYTIHFVTKKE*LVFHNTFLHNNKQY*HHTMYVGTEYYILQQYELLV 835
           D F K Y CSH CL   ++V              N      H +++  E Y       LV
Sbjct: 123 DRFSKIYCCSHLCLAIFYWVAPSSSTYLAYLGARNRSVPVEHVLHLEEELYWFHTRVSLV 182

Query: 836 RYKV 847
            Y +
Sbjct: 183 DYSI 186


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 295 NFYTTILFTSTKKESCISVTKMG*LFY 215
           +F T +L  + + +S +S+T +G LFY
Sbjct: 832 HFRTKLLSAACQMQSALSITDLGQLFY 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,088,200
Number of Sequences: 2352
Number of extensions: 21670
Number of successful extensions: 56
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 137338992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)