Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L11
         (1210 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p pro...    29   9.6  
AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA...    29   9.6  

>AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p
           protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 587 NIFYFTISTYLNYAFLSHKHFIFTDMFDKYICSHRCL--YTIHFVTKKE 727
           N+F+ T      +A   HK  ++ +  DKY+  H  L  +  +F +KKE
Sbjct: 488 NLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHERNFHSKKE 536


>AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA
           protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 587 NIFYFTISTYLNYAFLSHKHFIFTDMFDKYICSHRCL--YTIHFVTKKE 727
           N+F+ T      +A   HK  ++ +  DKY+  H  L  +  +F +KKE
Sbjct: 488 NLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDSLKNHERNFHSKKE 536


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,070,505
Number of Sequences: 53049
Number of extensions: 838741
Number of successful extensions: 1141
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6417528075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)