Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L09
(1242 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24583 Cluster: Vacuolar ATP synthase subunit F; n=27; ... 224 3e-57
UniRef50_Q16864 Cluster: Vacuolar ATP synthase subunit F; n=10; ... 172 1e-41
UniRef50_UPI0000507DA7 Cluster: PREDICTED: similar to ATPase, H+... 132 1e-29
UniRef50_Q9ZQX4 Cluster: Probable vacuolar ATP synthase subunit ... 119 1e-25
UniRef50_Q01AV9 Cluster: Putative Vacuolar ATP synthase subunit ... 107 4e-22
UniRef50_UPI00004992B6 Cluster: V-type ATPase, F subunit; n=1; E... 101 5e-20
UniRef50_A2F0C7 Cluster: V-type ATPase, F subunit family protein... 99 1e-19
UniRef50_Q8IHW4 Cluster: Vacuolar ATP synthase subunit F, putati... 96 2e-18
UniRef50_P39111 Cluster: Vacuolar ATP synthase subunit F; n=27; ... 95 3e-18
UniRef50_Q4TH57 Cluster: Chromosome undetermined SCAF3223, whole... 93 2e-17
UniRef50_Q9VNL3 Cluster: Probable vacuolar ATP synthase subunit ... 91 4e-17
UniRef50_Q4QGP0 Cluster: Vacuolar ATP synthase subunit, putative... 88 4e-16
UniRef50_Q23DI4 Cluster: V-type ATPase, F subunit family protein... 86 2e-15
UniRef50_Q86HF9 Cluster: Similar to H+-transporting ATPase; n=1;... 54 4e-14
UniRef50_Q7RRH7 Cluster: Vacuolar ATP synthase subunit f; n=1; P... 61 7e-08
UniRef50_Q8SSC3 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT F; n=1; E... 52 3e-05
UniRef50_Q7QZS1 Cluster: GLP_609_59429_59007; n=1; Giardia lambl... 50 2e-04
UniRef50_Q29CQ6 Cluster: GA13911-PA; n=1; Drosophila pseudoobscu... 46 0.003
UniRef50_O27037 Cluster: V-type ATP synthase subunit F; n=3; Met... 43 0.014
UniRef50_Q4Z2S8 Cluster: Putative uncharacterized protein; n=2; ... 37 1.2
>UniRef50_Q24583 Cluster: Vacuolar ATP synthase subunit F; n=27;
Bilateria|Rep: Vacuolar ATP synthase subunit F -
Drosophila melanogaster (Fruit fly)
Length = 124
Score = 224 bits (548), Expect = 3e-57
Identities = 102/124 (82%), Positives = 114/124 (91%)
Frame = +1
Query: 109 LALHAAVKGKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFV 288
+ALH+A+KGKLISVIGDEDTCVGFLLGG+GE NKNRHPNFMVVDK T VSE+E+CFKRF+
Sbjct: 1 MALHSAIKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFL 60
Query: 289 KRXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPD 468
KR LINQN AELIRHVIDAH++PVP+VLEIPSKDHPYDASKDSILRRA+GMFNP+
Sbjct: 61 KRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPE 120
Query: 469 DLVR 480
DLVR
Sbjct: 121 DLVR 124
>UniRef50_Q16864 Cluster: Vacuolar ATP synthase subunit F; n=10;
Mammalia|Rep: Vacuolar ATP synthase subunit F - Homo
sapiens (Human)
Length = 119
Score = 172 bits (419), Expect = 1e-41
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +1
Query: 124 AVKGKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXX 303
A +GKLI+VIGDEDT GFLLGGIGE NKNRHPNF+VV+K T ++EIE+ F++F+ R
Sbjct: 2 AGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDI 61
Query: 304 XXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDDL 474
LINQ IAE++RH +DAH +P+VLEIPSK+HPYDA+KDSILRRA+GMF +DL
Sbjct: 62 GIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
>UniRef50_UPI0000507DA7 Cluster: PREDICTED: similar to ATPase, H+
transporting, V1 subunit F; n=1; Rattus norvegicus|Rep:
PREDICTED: similar to ATPase, H+ transporting, V1
subunit F - Rattus norvegicus
Length = 114
Score = 132 bits (320), Expect = 1e-29
Identities = 63/108 (58%), Positives = 78/108 (72%)
Frame = +1
Query: 151 IGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLINQNI 330
+ DEDT GFLLG IGE NKNRHPNF+VV+K T ++EIE+ F+ F+ R LI I
Sbjct: 8 VTDEDTLTGFLLGSIGELNKNRHPNFLVVEKDTTINEIEDTFRMFLNRDDIGIILI--YI 65
Query: 331 AELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDDL 474
AE +R +DAH +P+VLEIPS HP+DA+KDSILRRAKG F +DL
Sbjct: 66 AETVRLALDAHGRSIPAVLEIPSNKHPHDAAKDSILRRAKGQFAAEDL 113
>UniRef50_Q9ZQX4 Cluster: Probable vacuolar ATP synthase subunit F;
n=13; Eukaryota|Rep: Probable vacuolar ATP synthase
subunit F - Arabidopsis thaliana (Mouse-ear cress)
Length = 128
Score = 119 bits (287), Expect = 1e-25
Identities = 52/112 (46%), Positives = 78/112 (69%)
Frame = +1
Query: 139 LISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLI 318
LI++I DEDT VGFL+ G+G + R N+++VD T V +IE+ FK F R L+
Sbjct: 14 LIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILL 73
Query: 319 NQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDDL 474
+Q IA +IR ++D+++ PVP++LEIPSKDHPYD + DS+L R K +F+ + +
Sbjct: 74 SQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESV 125
>UniRef50_Q01AV9 Cluster: Putative Vacuolar ATP synthase subunit F;
n=2; Viridiplantae|Rep: Putative Vacuolar ATP synthase
subunit F - Ostreococcus tauri
Length = 141
Score = 107 bits (258), Expect = 4e-22
Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = +1
Query: 133 GKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVK-RXXXXX 309
G L++VIGDEDT GFLL G+G ++ + N++VV + T EI + FK F R
Sbjct: 27 GDLVAVIGDEDTVTGFLLAGVGHVDERQRLNYLVVGERTTDDEIADAFKAFTSTREDVAV 86
Query: 310 XLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPD 468
LI Q IA+ IRH++DAHS +PSVLEIP K++PY DS+L R + + D
Sbjct: 87 VLITQVIADRIRHLVDAHSRAIPSVLEIPDKENPYRPESDSVLSRVRHLLGGD 139
>UniRef50_UPI00004992B6 Cluster: V-type ATPase, F subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: V-type ATPase, F
subunit - Entamoeba histolytica HM-1:IMSS
Length = 130
Score = 101 bits (241), Expect = 5e-20
Identities = 47/123 (38%), Positives = 72/123 (58%)
Frame = +1
Query: 100 SKNLALHAAVKGKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFK 279
++N A A I++IGDED+ GFLL GIG ++ + NF++VD T +I + F
Sbjct: 8 AQNQASQARKGDCQIAIIGDEDSVTGFLLAGIGSIDRMKRTNFLIVDNKTQHDKIAQTFN 67
Query: 280 RFVKRXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMF 459
+V R LI QN+A+ +R ++D + +P ++EIP KDHPY+ DS++ R K M
Sbjct: 68 EYVNRTDIAIVLITQNVADSMRDILDGYDRYLPVIMEIPCKDHPYNPDTDSVMVRLKRMT 127
Query: 460 NPD 468
D
Sbjct: 128 GRD 130
>UniRef50_A2F0C7 Cluster: V-type ATPase, F subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: V-type ATPase, F
subunit family protein - Trichomonas vaginalis G3
Length = 124
Score = 99 bits (238), Expect = 1e-19
Identities = 46/108 (42%), Positives = 66/108 (61%)
Frame = +1
Query: 133 GKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXX 312
G ++VIGDEDT GFLL GIG+ ++ NF++V T EIE+ FK F R
Sbjct: 12 GYYMAVIGDEDTVTGFLLTGIGQMETDKTCNFLLVRPKTTQEEIEKAFKTFTDRDDVAIL 71
Query: 313 LINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGM 456
INQ+IA IRH+I + P+P+++E+PSKDH Y +D + +R +
Sbjct: 72 FINQHIANEIRHLITEFNKPLPAIIEVPSKDHSYKPEEDPVFQRVSAL 119
>UniRef50_Q8IHW4 Cluster: Vacuolar ATP synthase subunit F, putative;
n=9; Apicomplexa|Rep: Vacuolar ATP synthase subunit F,
putative - Plasmodium falciparum (isolate 3D7)
Length = 140
Score = 95.9 bits (228), Expect = 2e-18
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 12/121 (9%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLIN 321
I +IGDED+ VGFLL GIG + NF +V+ T SEIEE FK + + LIN
Sbjct: 16 IYIIGDEDSVVGFLLAGIGFRDGLGKKNFFIVNSKTNKSEIEEVFKEYSSKHDCGVILIN 75
Query: 322 QN------------IAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNP 465
Q IA+ IR+++D H +P+VLEIPSKD P+D +KDSI++R K F
Sbjct: 76 QQVIKNMYIYIYIYIADEIRYLVDLHDKILPTVLEIPSKDKPFDPNKDSIIQRVKLFFGG 135
Query: 466 D 468
D
Sbjct: 136 D 136
>UniRef50_P39111 Cluster: Vacuolar ATP synthase subunit F; n=27;
Fungi/Metazoa group|Rep: Vacuolar ATP synthase subunit F
- Saccharomyces cerevisiae (Baker's yeast)
Length = 118
Score = 95.5 bits (227), Expect = 3e-18
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Frame = +1
Query: 124 AVKGKLISVIGDEDTCVGFLLGGIGEXN-KNRHPNFMVVDKX-TPVSEIEECFKRFVK-R 294
A K LI+VI DEDT G LL GIG+ + + NF V + T EI + F F + R
Sbjct: 2 AEKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEER 61
Query: 295 XXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMF 459
LINQ+IAE IR +D+ + P++LEIPSKDHPYD KDS+L+R + +F
Sbjct: 62 DDIAILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDPEKDSVLKRVRKLF 116
>UniRef50_Q4TH57 Cluster: Chromosome undetermined SCAF3223, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3223,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 170
Score = 92.7 bits (220), Expect = 2e-17
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +1
Query: 124 AVKGKLISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKR 294
A +GKLI+VIGDEDTC GFLLGGIGE NKNR PNF+VV+K T ++EIEE FK F+ R
Sbjct: 2 AARGKLIAVIGDEDTCTGFLLGGIGELNKNRKPNFLVVEKDTSITEIEETFKSFLAR 58
>UniRef50_Q9VNL3 Cluster: Probable vacuolar ATP synthase subunit F
2; n=1; Drosophila melanogaster|Rep: Probable vacuolar
ATP synthase subunit F 2 - Drosophila melanogaster
(Fruit fly)
Length = 129
Score = 91.5 bits (217), Expect = 4e-17
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +1
Query: 226 FMVVDKXTPVSEIEECFKRFVKRXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKD 405
F + TP +IEECFK+F++R LINQ A++IR +DAH+ VP+VLEIPSK
Sbjct: 46 FHCIPDTTP-KQIEECFKKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQ 104
Query: 406 HPYDASKDSILRRAKGMFNPDD 471
HPYD+S+DSIL+RA+ + P +
Sbjct: 105 HPYDSSRDSILKRAQRVITPPE 126
>UniRef50_Q4QGP0 Cluster: Vacuolar ATP synthase subunit, putative;
n=8; Trypanosomatidae|Rep: Vacuolar ATP synthase
subunit, putative - Leishmania major
Length = 137
Score = 88.2 bits (209), Expect = 4e-16
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 14/117 (11%)
Frame = +1
Query: 136 KLISVIGDEDTCVGFLLGGIGE----XNKNRH----------PNFMVVDKXTPVSEIEEC 273
+++ +IGDEDT GFLL G+G+ N+ + PN+ VV P+SEIEE
Sbjct: 13 RIVGIIGDEDTVTGFLLAGVGDNRVMLNQRENPEEGQQSKLPPNYYVVTPSMPLSEIEEA 72
Query: 274 FKRFVKRXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRR 444
F +R +I Q+IA IRH+++ H++ +P +LEIPSK YDA KD +L +
Sbjct: 73 FTTMCRRKDIGIIIICQHIANDIRHLLEEHNSVIPCILEIPSKGQKYDAEKDFVLEK 129
>UniRef50_Q23DI4 Cluster: V-type ATPase, F subunit family protein;
n=4; Oligohymenophorea|Rep: V-type ATPase, F subunit
family protein - Tetrahymena thermophila SB210
Length = 193
Score = 86.2 bits (204), Expect = 2e-15
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 139 LISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLI 318
L+S+ DT GFLL GIG+ N NF+VV T +E+ F F+K L+
Sbjct: 82 LVSI--QNDTVTGFLLTGIGDRNLKGQSNFLVVQPDTKEKLVEDTFNGFLKNGDIAVILV 139
Query: 319 NQNIAE-LIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDDLV 477
+Q++AE +R +I+++ +P++LEIPSKD PY+ KD I++RA + ++V
Sbjct: 140 SQHVAEKYLRSIINSYEETLPAILEIPSKDKPYEPKKDIIMQRANKLLYGSEIV 193
>UniRef50_Q86HF9 Cluster: Similar to H+-transporting ATPase; n=1;
Dictyostelium discoideum|Rep: Similar to H+-transporting
ATPase - Dictyostelium discoideum (Slime mold)
Length = 92
Score = 53.6 bits (123), Expect(2) = 4e-14
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 313 LINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPD 468
L+ + A+ IR++ID + +P++LEIPSKDHPYD K S++ + K M D
Sbjct: 41 LVVDSRADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKASVMLKVKKMAGSD 92
Score = 48.4 bits (110), Expect(2) = 4e-14
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +1
Query: 139 LISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVD 240
L++VIGDED GFLL G+G+ +K ++ NF+VVD
Sbjct: 11 LVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVD 44
>UniRef50_Q7RRH7 Cluster: Vacuolar ATP synthase subunit f; n=1;
Plasmodium yoelii yoelii|Rep: Vacuolar ATP synthase
subunit f - Plasmodium yoelii yoelii
Length = 92
Score = 60.9 bits (141), Expect = 7e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 316 INQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPD 468
+ IA+ IRH++D H +P+VLEIPSKD P+D +KDSI++R K F D
Sbjct: 37 VESTIADEIRHLVDLHDKILPTVLEIPSKDKPFDPNKDSIIQRVKLFFGGD 87
>UniRef50_Q8SSC3 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT F; n=1;
Encephalitozoon cuniculi|Rep: VACUOLAR ATP SYNTHASE
SUBUNIT F - Encephalitozoon cuniculi
Length = 95
Score = 52.0 bits (119), Expect = 3e-05
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLIN 321
I +IGDE+T GFL+ G+ N + +PN + V T ++ F R L+
Sbjct: 7 IGIIGDEETLTGFLIAGV--ENTHDNPNLIQVASATSEDDLRRAFYSLTSREDLAIVLVC 64
Query: 322 QNIAELIRHVIDAHSAPVPSVLEIPSKD 405
AE ++ ID + VP++L I SK+
Sbjct: 65 DFAAEKLKDEIDTYKEIVPAILVIASKN 92
>UniRef50_Q7QZS1 Cluster: GLP_609_59429_59007; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_609_59429_59007 - Giardia lamblia
ATCC 50803
Length = 140
Score = 49.6 bits (113), Expect = 2e-04
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLIN 321
I ++ DE T GFLL G G + NF VVD+ +++E F+ +++
Sbjct: 47 IGILADEATITGFLLAGAGCISSGNQKNFHVVDQNVSKADVEAAFEELRNSPDISIIMVS 106
Query: 322 QNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDAS 423
+ E I+ I + V+ P+KD AS
Sbjct: 107 NGVMETIKDTIAEYDLQGKVVMPFPTKDSGLFAS 140
>UniRef50_Q29CQ6 Cluster: GA13911-PA; n=1; Drosophila
pseudoobscura|Rep: GA13911-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 154
Score = 45.6 bits (103), Expect = 0.003
Identities = 22/87 (25%), Positives = 47/87 (54%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLIN 321
+ +I D + +GFLL GIG N++ ++++V+ P EIE F++ + +++
Sbjct: 49 VGIIADTEVTLGFLLAGIGFRRDNQN-SYLMVESDMPQEEIESFFEQLYRMHNLGIIILD 107
Query: 322 QNIAELIRHVIDAHSAPVPSVLEIPSK 402
+ ++ V+D +P V+ +P+K
Sbjct: 108 FPTHKRLKSVLDKCKNMLPVVVVVPNK 134
>UniRef50_O27037 Cluster: V-type ATP synthase subunit F; n=3;
Methanobacteriaceae|Rep: V-type ATP synthase subunit F -
Methanobacterium thermoautotrophicum
Length = 106
Score = 43.2 bits (97), Expect = 0.014
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPVSEIEECFKRFVKRXXXXXXLIN 321
I+V+GD DT GF LGG+ E VV+ TP E EE + + R ++
Sbjct: 5 IAVVGDRDTVTGFRLGGVREG--------YVVE--TP-DEAEETIRNLI-RDGFSIIIVT 52
Query: 322 QNIAELIRHVID--AHSAPVPSVLEIPSKDHPYDASKDSI 435
+ I + +R I+ S+ +P ++EIP K P + D +
Sbjct: 53 EKIGDELREFIEETTSSSALPMIIEIPDKTGPSERETDPL 92
>UniRef50_Q4Z2S8 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 80
Score = 36.7 bits (81), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 142 ISVIGDEDTCVGFLLGGIGEXNKNRHPNFMVVDKXTPV 255
I +IGDED+ VGFLL GIG + NF +V+ +
Sbjct: 16 IYIIGDEDSVVGFLLAGIGFRDGLGKKNFFIVNSSNEI 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,138,062
Number of Sequences: 1657284
Number of extensions: 14918776
Number of successful extensions: 33843
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 32139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33772
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125530395290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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