Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L08
         (1224 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.22 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   6.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 0.22
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 310 SSNEFRFEGRSSRCNYTETLELISQGGWR 396
           + N  ++ G +    Y E +EL  +GGW+
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWK 312


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 325 RFEGRSSRCNYTETLELISQGGW 393
           R+ G      Y E +E  + GGW
Sbjct: 293 RYTGERGMMGYNEIVEAQNAGGW 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,470
Number of Sequences: 336
Number of extensions: 2476
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35760828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)