Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L05
         (1221 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   2.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   3.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   4.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   6.1  

>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 213 IINRIT-LPHQSIDRTSTQISTKKGIKMVQEGVVDREIKEDQGIRI 347
           I  R++ LP   + + S +++   G+K V   VVD E   D+ I I
Sbjct: 245 IFERLSVLPVDKLLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 213 IINRIT-LPHQSIDRTSTQISTKKGIKMVQEGVVDREIKEDQGIRI 347
           I  R++ LP   + + S +++   G+K V   VVD E   D+ I I
Sbjct: 245 IFERLSALPVDKLLQISEKVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 213 IINRIT-LPHQSIDRTSTQISTKKGIKMVQEGVVDREIKEDQGIRI 347
           I  R++ LP     + S +++   G+K V   VVD E   D+ I I
Sbjct: 247 IFERLSILPVDEFLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 292


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 213 IINRIT-LPHQSIDRTSTQISTKKGIKMVQEGVVDREIKEDQGI 341
           I  R++ LP   + + S +++   G+K V   VVD E   D+ I
Sbjct: 247 IFERLSALPVDKLLQISEEVANIWGLKKVYAPVVDGEFLTDEPI 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,274
Number of Sequences: 336
Number of extensions: 3317
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35658067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)