Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L03
         (1233 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756...    46   5e-05
09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666     30   3.3  
01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412     29   5.7  
07_01_0710 - 5355277-5355666                                           29   7.5  

>06_03_1344 -
           29472139-29473292,29474478-29475386,29475504-29475618,
           29476017-29476218,29477177-29477296,29477431-29477582,
           29478177-29478461
          Length = 978

 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
 Frame = +2

Query: 440 EWQRKYNAPRESYCKGDNEIRDQPFGILVRNVRCIKCHKWGHINTDKECTMYTLSM-SEA 616
           E++   NAPR    +     R +PFG+ VRNVRC++C  +GH + D+EC +  + M +E 
Sbjct: 177 EFEVLKNAPR---LETGAPARVKPFGVEVRNVRCLRCGNYGHQSGDRECPLKDVIMPNEE 233

Query: 617 RALQASTSTPEEKEEKPDVPTLMQQMRDTGLIMKPGALPLTAAKVEDNDSTNLTEHDLIS 796
             L+          +      L  ++R      KPG  P       D+ +  +   D+  
Sbjct: 234 SRLKRDDPLTAIMAQTDSSEPLKWELR-----QKPGMSPPRGGYNPDDPNQQIVAEDIFD 288

Query: 797 Q 799
           +
Sbjct: 289 E 289


>09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666
          Length = 366

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +2

Query: 602 SMSEARALQASTSTPEEKEE---KPDVPTLMQQMRDTGLIMKPGALP 733
           S  EAR L A    PEE+EE   +P+ P    +   T  +M P  LP
Sbjct: 71  SAEEARCLWAKLPAPEEEEEAGQQPERPPSSYRRPPTSTLMAPVGLP 117


>01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412
          Length = 255

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +2

Query: 533 VRCIKCHKWGHINTDKECTMYTLSMSEARALQASTSTPEEKEEKPDVPTL 682
           V+C +C +WGHI+  +EC     ++ E     A TS+ +   +  D+ T+
Sbjct: 93  VQCFRCDEWGHIS--RECP----TLKEKAKANAVTSSNDSDSDGCDLLTM 136


>07_01_0710 - 5355277-5355666
          Length = 129

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -3

Query: 154 GXDNERGGTXRRNXAXQRRXEMEXAXRKXERGKPXXTQAXXDXKAXEGAR 5
           G +NERGG  RR      R  +  A    ER     +      +  EGAR
Sbjct: 70  GGENERGGRSRRRRGRVARGPLAPAGESRERTSAANSGEGRRRRVAEGAR 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,651,226
Number of Sequences: 37544
Number of extensions: 264799
Number of successful extensions: 655
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)