Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L03
         (1233 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80447-4|AAB37808.1|  560|Caenorhabditis elegans Temporarily ass...   114   1e-25
DQ645890-1|ABG34266.1|  560|Caenorhabditis elegans CIR-1 protein.     114   1e-25
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr...    33   0.42 
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical...    33   0.42 
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p...    30   3.9  
Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical pr...    30   3.9  
Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical pr...    30   3.9  
Z12017-5|CAA78052.2|  859|Caenorhabditis elegans Hypothetical pr...    30   3.9  

>U80447-4|AAB37808.1|  560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 326 protein.
          Length = 560

 Score =  114 bits (275), Expect = 1e-25
 Identities = 58/145 (40%), Positives = 73/145 (50%)
 Frame = +2

Query: 161 GXGFNHSLCQXFFHPASSANLXRVWXXXXXXXXXXXXXXXXXXXXXXXXXLHXHKAXXXX 340
           G GF + + +  FHP++  NL  VW                         +  +KA    
Sbjct: 2   GKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGD 61

Query: 341 XXXXXXXXNFMYXPPPGVKXXRXXXXXXXXYKFEWQRKYNAPRESYCKGDNEIRDQPFGI 520
                   +FMY  P G+             KFEWQRKY APRE + KG+ EI+DQPFGI
Sbjct: 62  EKAKMGL-SFMYDAPAGMTKREEPKEEP---KFEWQRKYQAPREDWAKGNEEIQDQPFGI 117

Query: 521 LVRNVRCIKCHKWGHINTDKECTMY 595
            VRNVRC KCHKWGHINTD+EC ++
Sbjct: 118 QVRNVRCCKCHKWGHINTDRECPLF 142


>DQ645890-1|ABG34266.1|  560|Caenorhabditis elegans CIR-1 protein.
          Length = 560

 Score =  114 bits (275), Expect = 1e-25
 Identities = 58/145 (40%), Positives = 73/145 (50%)
 Frame = +2

Query: 161 GXGFNHSLCQXFFHPASSANLXRVWXXXXXXXXXXXXXXXXXXXXXXXXXLHXHKAXXXX 340
           G GF + + +  FHP++  NL  VW                         +  +KA    
Sbjct: 2   GKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGD 61

Query: 341 XXXXXXXXNFMYXPPPGVKXXRXXXXXXXXYKFEWQRKYNAPRESYCKGDNEIRDQPFGI 520
                   +FMY  P G+             KFEWQRKY APRE + KG+ EI+DQPFGI
Sbjct: 62  EKAKMGL-SFMYDAPAGMTKREEPKEEP---KFEWQRKYQAPREDWAKGNEEIQDQPFGI 117

Query: 521 LVRNVRCIKCHKWGHINTDKECTMY 595
            VRNVRC KCHKWGHINTD+EC ++
Sbjct: 118 QVRNVRCCKCHKWGHINTDRECPLF 142


>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
            W04A8.7 protein.
          Length = 1792

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 524  VRNVRCIKCHKWGHINTDKECTMY 595
            ++ +RC  CH +GH+ T++ C +Y
Sbjct: 1263 LQKMRCSACHAYGHMKTNRNCPLY 1286


>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
            protein W04A8.7 protein.
          Length = 1792

 Score = 33.1 bits (72), Expect = 0.42
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 524  VRNVRCIKCHKWGHINTDKECTMY 595
            ++ +RC  CH +GH+ T++ C +Y
Sbjct: 1263 LQKMRCSACHAYGHMKTNRNCPLY 1286


>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
           protein Y49E10.19 protein.
          Length = 1159

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +2

Query: 431 YKFEWQRKYNAPRESYCKG 487
           Y++++Q +YN P+E+Y KG
Sbjct: 115 YEYDYQSQYNKPKEAYMKG 133


>Z12017-7|CAH19088.1|  856|Caenorhabditis elegans Hypothetical
           protein R08D7.6c protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 661 KTRCTNSHATDA*HGPHHETGSTASDCC*G 750
           +T C NS   D  H  HHE  S  S CC G
Sbjct: 18  QTNCQNSQRGDGLHHHHHEAAS-GSTCCGG 46


>Z12017-6|CAE47469.1|  734|Caenorhabditis elegans Hypothetical
           protein R08D7.6b protein.
          Length = 734

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 661 KTRCTNSHATDA*HGPHHETGSTASDCC*G 750
           +T C NS   D  H  HHE  S  S CC G
Sbjct: 18  QTNCQNSQRGDGLHHHHHEAAS-GSTCCGG 46


>Z12017-5|CAA78052.2|  859|Caenorhabditis elegans Hypothetical
           protein R08D7.6a protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 661 KTRCTNSHATDA*HGPHHETGSTASDCC*G 750
           +T C NS   D  H  HHE  S  S CC G
Sbjct: 18  QTNCQNSQRGDGLHHHHHEAAS-GSTCCGG 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,762
Number of Sequences: 27780
Number of extensions: 229976
Number of successful extensions: 686
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)