Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L03
         (1233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   9.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   9.6  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 431 YKFEWQRKYNAPRESYCKGDNEIRDQPFGILVRNV 535
           Y F++Q K N    +       +RD  F +L +N+
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDPAFYMLYQNI 427


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/43 (20%), Positives = 23/43 (53%)
 Frame = +3

Query: 456  TMLLEKAIVKETMKSEISLLVYLSGM*DALSVISGDISIQIRN 584
            +MLL++  +   + S+  + +Y  G+     + + D+S+ + N
Sbjct: 1331 SMLLDEVDISMEVPSDALIALYSQGLFSLSEIDNLDVSLDVSN 1373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,045
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)