Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_L02
(1246 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 172 1e-41
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 145 2e-33
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 1e-30
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 126 9e-28
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 115 3e-24
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 111 3e-23
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 107 6e-22
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 103 1e-20
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 95 4e-18
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 91 4e-17
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 75 5e-12
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 73 1e-11
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 72 4e-11
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 71 8e-11
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 69 2e-10
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 69 3e-10
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 67 1e-09
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 64 7e-09
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 62 2e-08
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 57 1e-06
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 52 2e-05
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 52 3e-05
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 52 4e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 49 2e-04
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 49 3e-04
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 49 3e-04
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 46 0.003
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.033
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 1.2
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 2.9
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 35 5.0
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 35 5.0
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 8.8
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 172 bits (419), Expect = 1e-41
Identities = 79/105 (75%), Positives = 94/105 (89%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SKEL QK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 506
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 40.3 bits (90), Expect = 0.10
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 131 QNRXRHFSAPSHLRRVLMSSPL 196
+NR RHF+APSH+RR +MSSPL
Sbjct: 13 KNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 145 bits (351), Expect = 2e-33
Identities = 69/105 (65%), Positives = 88/105 (83%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SKEL QK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+QVYRKK+V+YI++++REKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 506
T VGIHPSK VI +LK+ +DRK IL+R+ +GK+KGKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (329), Expect = 1e-30
Identities = 66/102 (64%), Positives = 83/102 (81%), Gaps = 2/102 (1%)
Frame = +3
Query: 207 LSQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 380
L+ NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 381 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 506
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 126 bits (305), Expect = 9e-28
Identities = 60/90 (66%), Positives = 76/90 (84%)
Frame = +3
Query: 237 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIV 416
P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 417 KLKMNKDRKAILDRRAKGRLAALGKDKGKY 506
KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 117 KLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 115 bits (276), Expect = 3e-24
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P S EL K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ERI R+K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 491
+ + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 111 bits (268), Expect = 3e-23
Identities = 47/89 (52%), Positives = 71/89 (79%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SKEL K+ +++P+RKDDEV + RGH G++ GKV+++ RK+F +Y+ER+ REKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 378 AYVGIHPSKCVIVKLKMNKDRKAILDRRA 464
++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 107 bits (257), Expect = 6e-22
Identities = 49/95 (51%), Positives = 71/95 (74%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SKEL ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V ++++ +EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 476
A+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 103 bits (246), Expect = 1e-20
Identities = 47/98 (47%), Positives = 71/98 (72%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SK+L +K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + IE++ R KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 378 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 491
+ I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 94.7 bits (225), Expect = 4e-18
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SKEL +K+NV ++PI KDDEV++++GH K GKV V R K+V+ I+++ + KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 378 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 473
V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 91.5 bits (217), Expect = 4e-17
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
+KE ++ VK +PIR+DDEV + G + G++ GKV+ V + + ++ REK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 378 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR---LAALGKDK 497
+V +HPS C+I KLKM+K RK +++RR GR LA LG +K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAKLGHNK 137
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 74.5 bits (175), Expect = 5e-12
Identities = 35/57 (61%), Positives = 46/57 (80%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 362
P S L K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI EK
Sbjct: 51 PLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISHEK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 73.3 bits (172), Expect = 1e-11
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SK+L ++ ++ +P+R D V ++RG +KG + GKV +V K+ +Y++ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 372 ATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 488
Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 71.7 bits (168), Expect = 4e-11
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P S EL++++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 372 ATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 464
Y+ IH SK I KL N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 70.5 bits (165), Expect = 8e-11
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 204 ELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 383
EL +KFN +S+P+R+ D V+++RG +KG + G+V++V K+ +Y+E E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 384 VGIHPSKCVIVKLKMNKD-RKAILDR 458
IHPS +I++ ++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 69.3 bits (162), Expect = 2e-10
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
S++L +++ +K + IRK D V+++RG G + GKV++V RK+ V IE + ++KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 378 AYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDKGK 503
YV +H SK +I KL +K+R ++R+ K R K K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 68.5 bits (160), Expect = 3e-10
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P S EL QK +K + +RK D V +VRG +KG + GKV V KK +++E KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 467
IHPSK V+ +L ++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 66.9 bits (156), Expect = 1e-09
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SKEL + +K+MPIR+ D V++ G +KG GKV++V R+ + + +E I ++ N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 378 AYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 491
V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 64.1 bits (149), Expect = 7e-09
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SKEL +K ++P+RK D V+++RG +KG + G+V++V K++ +Y+E ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 378 AYVGIHPSKCVIVKLKMNKDRK 443
IHPS +I+KL +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
S EL + ++PIR +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 56.8 bits (131), Expect = 1e-06
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
S+EL +++ ++ P+R D V V G + G++ G + ++ + + VYIE K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 378 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 473
A V I+PSK I K + RK L+R+ + R
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 52.4 bits (120), Expect = 2e-05
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKG 287
S EL K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 52.0 bits (119), Expect = 3e-05
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SK+L +K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 378 AYVGIHPSKCVIVKLKMNKDRK 443
GI P K I L +++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 51.6 bits (118), Expect = 4e-05
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SK+L +K+ +S+ + + D V ++RG +KG GKV +V K V IE +++EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 378 AYVGIHPSKCVIVKL 422
V IH S ++ L
Sbjct: 87 FDVFIHTSNLLVTSL 101
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 49.2 bits (112), Expect = 2e-04
Identities = 32/77 (41%), Positives = 41/77 (53%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SKEL K+ +S+ + + D V VVRG YK GKV V + V IE I++EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 372 ATAYVGIHPSKCVIVKL 422
V I SK V+ L
Sbjct: 85 DKFDVLIRASKVVVTGL 101
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 48.8 bits (111), Expect = 3e-04
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
SKE+ + K++ ++K+ E++V RG +KG+ GKV+Q+ ++ ++++ I R K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKGK-TGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 378 AYVGIHPSKCVIVKL 422
+V + PS I+K+
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 48.8 bits (111), Expect = 3e-04
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +3
Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
P SKEL +K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 372 ATAYVGIHPSKCVIVKLKMNKDRK 443
HPSK I+KL ++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 45.6 bits (103), Expect = 0.003
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +3
Query: 198 SKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 377
S+ L++++ +S + D V+++RG +KG + GKV V + ++ + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 378 AYVGIHPSKCVIVKLKMNKDRKA 446
I+PS +I KL+M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.033
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 225 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 362
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 1.2
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 234 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 350
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 35.5 bits (78), Expect = 2.9
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -2
Query: 549 YLFKRPPWLWQFPRCIYPCLCQAQPVCPLLCDRGLLCG 436
YL P W W FP P L + Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 34.7 bits (76), Expect = 5.0
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 134 NRXRHFSAPSHLRRVLMSSP 193
NR RH +APSH+RR +MSSP
Sbjct: 110 NRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.7 bits (76), Expect = 5.0
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 210 SQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 362
S+ K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 9 SEYTKFKKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 8.8
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3
Query: 240 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 386
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,800,984
Number of Sequences: 1657284
Number of extensions: 10031819
Number of successful extensions: 27204
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27163
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125935332049
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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