Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L02
         (1246 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   6.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   8.3  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 408 HTLKGECRHMLLHHWPFLFESS 343
           HT + +C H LL H P L + S
Sbjct: 352 HTPEPDCIHELLGHMPLLADPS 373


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -3

Query: 434 FIHLQLDNDTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLTFVVSTYNLNF 255
           F   +L+N +L  +N  +    +GL+ LN  + ++   +I      N + F V+ +  +F
Sbjct: 316 FCKKKLENYSLQLINHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAGFISDF 375


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 7   SPLXGLLYYFCTSFSLSVLRRVVLAHRASMQFNKQV 114
           SP+  L+Y +C   + +V  R V   R     N+ +
Sbjct: 152 SPIFNLVYVYCCDNNFNVFLRQVFTCRCKDYKNEDL 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,509
Number of Sequences: 336
Number of extensions: 2594
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36480155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)