Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_L02
         (1246 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...   125   8e-29
Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...    93   5e-19
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...    93   5e-19

>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score =  125 bits (301), Expect = 8e-29
 Identities = 56/105 (53%), Positives = 81/105 (77%)
 Frame = +3

Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
           P +KEL  K  ++++PIR DDEV V+RG +KG   G+V++ YRKKFV++I++I REKANG
Sbjct: 33  PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91

Query: 372 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 506
           +T ++GIHPSK  I KLK++KDR+A+++R+A GR    G  KGK+
Sbjct: 92  STVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136



 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 131 QNRXRHFSAPSHLRRVLMSSPL 196
           ++R  HF+APSH RR +MS+PL
Sbjct: 13  KSRKAHFNAPSHERRRIMSAPL 34


>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score = 92.7 bits (220), Expect = 5e-19
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = +3

Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
           P +KEL  K  ++++PIR DDEV V+RG +KG   G+V++ YRKKFV++I++I REKANG
Sbjct: 33  PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91

Query: 372 ATAYVGIHPSK 404
           +T ++GIHPSK
Sbjct: 92  STVHIGIHPSK 102



 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 131 QNRXRHFSAPSHLRRVLMSSPL 196
           ++R  HF+APSH RR +MS+PL
Sbjct: 13  KSRKAHFNAPSHERRRIMSAPL 34


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score = 92.7 bits (220), Expect = 5e-19
 Identities = 40/71 (56%), Positives = 57/71 (80%)
 Frame = +3

Query: 192 PXSKELSQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 371
           P +KEL  K  ++++PIR DDEV V+RG +KG   G+V++ YRKKFV++I++I REKANG
Sbjct: 33  PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91

Query: 372 ATAYVGIHPSK 404
           +T ++GIHPSK
Sbjct: 92  STVHIGIHPSK 102



 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 131 QNRXRHFSAPSHLRRVLMSSPL 196
           ++R  HF+APSH RR +MS+PL
Sbjct: 13  KSRKAHFNAPSHERRRIMSAPL 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,902,069
Number of Sequences: 27780
Number of extensions: 253813
Number of successful extensions: 682
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)