Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K24
(1179 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 123 1e-26
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 106 1e-21
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 87 8e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 1e-12
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 73 1e-11
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-10
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 64 9e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 45 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 42 0.023
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.031
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.12
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.50
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 8.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 123 bits (296), Expect = 1e-26
Identities = 56/73 (76%), Positives = 57/73 (78%)
Frame = +1
Query: 751 PXKAPSCALLFRPCRLPDTCPPFSLREAWRXLIXHAVGISXRCRSXAPSWAVCTNXXXXX 930
P +APSCALLFRPCRLPDTCPPFSLREAWR LI HAVGIS RCRS APSWAVCTN
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Query: 931 XXXXXXVTIVLSP 969
VTIVLSP
Sbjct: 109 TAAPYPVTIVLSP 121
Score = 81.0 bits (191), Expect = 5e-14
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +3
Query: 609 SKRPXTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 755
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 50
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 106 bits (254), Expect = 1e-21
Identities = 62/105 (59%), Positives = 67/105 (63%)
Frame = +3
Query: 441 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQEXTCEQKASKRP 620
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 621 XTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 755
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 77 I---RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 87.0 bits (206), Expect = 8e-16
Identities = 44/86 (51%), Positives = 49/86 (56%)
Frame = -1
Query: 975 PGWTQDDSYRIRXXGRAERGVXAHSPAWSXRPTPX*DTYSVXYEXAPRFPKGERRTGIR* 796
PGWTQDDSYR RAERGV A+SPAWS RP P DT SV YE APRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 795 AAGSEQESARGSFXGGNAWYLYSPVG 718
A G + SPVG
Sbjct: 68 KRQGRNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 1e-12
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 627 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 755
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 73.3 bits (172), Expect = 1e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -1
Query: 978 LPGWTQDDSYRIRXXGRAERGVXAHSPAWSXRPTP 874
LPGWTQDDSYRIR GRAERGV AHSPAWS RPTP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 69.7 bits (163), Expect = 1e-10
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +3
Query: 768 VRSPVPTLPLTGYLSAFLPSGSVALXHXSRCRYLXXV 878
+RSPVPTLPLTGYLSAFLPSGSVAL H SRCRYL V
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 63.7 bits (148), Expect = 9e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1
Query: 975 PGWTQDDSYRIRXXGRAERGVXAHSPAWSXRPTPX*DT 862
PGWTQ +SYRIR RAERGV A+SPAWS RPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -2
Query: 617 PFAGLLLTCXFLRYPLILWITVLPPLSELIPLAAAERP 504
P LLTC F YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 417 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 584
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 44.8 bits (101), Expect = 0.004
Identities = 30/80 (37%), Positives = 33/80 (41%)
Frame = +1
Query: 730 IKIPGVSPXKAPSCALLFRPCRLPDTCPPFSLREAWRXLIXHAVGISXRCRSXAPSWAVC 909
+KI VS P P PPFSL + GIS RCRS APSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 910 TNXXXXXXXXXXXVTIVLSP 969
N VT+ LSP
Sbjct: 92 KNPPFSPTAAPYPVTVHLSP 111
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.4 bits (100), Expect = 0.006
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 516 CGERYQLTQRR*YG--YPQNQGITQEXTCEQKASKRPXTVKRPRCWRFSIGSAPLTSITK 689
C R Q R G +P+N I + + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 690 IDAQVRGGETRQDYKDTRRFPLXS 761
I Q + +T+ +YK T FPL S
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 42.3 bits (95), Expect = 0.023
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +3
Query: 906 VHXPPVQPDRXXLSGNYRLESXRVK 980
+H PPVQPDR LSGNYRLES V+
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVR 25
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 41.9 bits (94), Expect = 0.031
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 536 HSKAVIRLSTESGDNAGXNM 595
HSKAVIRLSTESGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 39.9 bits (89), Expect = 0.12
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 220 DPDMIRYIDEXGQTTTXMQ 276
DPDMIRYIDE GQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.12
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 487 ERGSGRAPNTQTASPRALADSLMQ 416
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.9 bits (84), Expect = 0.50
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 418 ALMNRPTXGERRFAYW 465
ALMNRPT GERRFAYW
Sbjct: 26 ALMNRPTRGERRFAYW 41
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 8.2
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 626 GXWPFAGLLLTCXFLRYP---LILWITVLPPLSELIPLAAAERP 504
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,795,697
Number of Sequences: 1657284
Number of extensions: 14278895
Number of successful extensions: 32450
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32427
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 117912272470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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