Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K23
(1144 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 178 2e-43
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 159 1e-37
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 135 2e-30
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 132 2e-29
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 126 8e-28
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 122 2e-26
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 114 3e-24
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 105 3e-21
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 96 2e-18
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 82 3e-14
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 74 8e-12
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 1e-11
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 72 2e-11
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 1e-06
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 55 4e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 53 1e-05
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 51 6e-05
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 46 0.001
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.010
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.022
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 42 0.022
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.069
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 41 0.069
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 41 0.069
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.16
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 39 0.21
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 38 0.37
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.5
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 36 2.0
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 36 2.0
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 35 3.4
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 4.5
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 4.5
UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1; ... 34 6.0
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 7.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 178 bits (433), Expect = 2e-43
Identities = 85/99 (85%), Positives = 90/99 (90%)
Frame = +3
Query: 177 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 356
L F TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYV
Sbjct: 26 LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYV 85
Query: 357 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPAT 473
P VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 159 bits (386), Expect = 1e-37
Identities = 72/95 (75%), Positives = 86/95 (90%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
VSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 135 bits (327), Expect = 2e-30
Identities = 63/95 (66%), Positives = 75/95 (78%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQEEERERRDNYVPE
Sbjct: 83 FHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 142
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
SAL+ +IIEVDPDTK ML + F ++ Q TQP
Sbjct: 143 GSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 132 bits (318), Expect = 2e-29
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQEEERE RDNYVPE
Sbjct: 29 FYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPE 87
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 476
+S L+ + +EVDPDTK+ML++LDF +++ LQ+T+P +
Sbjct: 88 ISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 126 bits (305), Expect = 8e-28
Identities = 58/95 (61%), Positives = 76/95 (80%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVPE
Sbjct: 82 FCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPE 141
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
+SA + + IEVDPDTK+M K+L+F +++ LQ+TQP
Sbjct: 142 ISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 122 bits (294), Expect = 2e-26
Identities = 56/95 (58%), Positives = 77/95 (81%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQEE ERR +Y+PE
Sbjct: 65 FYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQEE--ERRADYIPE 122
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
VSAL+ +I EVDP TK+MLK+LD +++ LQ+TQP
Sbjct: 123 VSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 114 bits (275), Expect = 3e-24
Identities = 54/96 (56%), Positives = 73/96 (76%)
Frame = +3
Query: 177 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 356
L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQEEERERR ++V
Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85
Query: 357 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 464
PE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 86 PEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 105 bits (251), Expect = 3e-21
Identities = 51/95 (53%), Positives = 71/95 (74%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + ER +++ YVPE
Sbjct: 77 FHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPE 129
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
VSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 130 VSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 95.9 bits (228), Expect = 2e-18
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QEEERERR +YVPE
Sbjct: 68 FHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPE 127
Query: 363 VSALEHDIIEVDPDTKDMLK 422
S+++ D + D D K ML+
Sbjct: 128 KSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 81.8 bits (193), Expect = 3e-14
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQEEERERR ++ P
Sbjct: 28 FYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPA 87
Query: 363 VSALEHDI---IEVDPDTKDMLKMLD 431
S ++ I + VD T ML+ L+
Sbjct: 88 TSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 73.7 bits (173), Expect = 8e-12
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVPE
Sbjct: 28 FYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPE 86
Query: 363 VSALEHDIIEVDPDTKDMLKMLDFNNIN 446
S L+ +I EVD TK+MLK+ F +++
Sbjct: 87 GSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 1e-11
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 258 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 437
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
FD N + +++A++ +K L+N+IAG+ T L +++ + IK EEERER++N +P+
Sbjct: 28 FDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPK 87
Query: 363 VSALEHDIIEVDPDTKDMLK 422
S L+ D +EVD T +M+K
Sbjct: 88 ESMLDVDCVEVDDVTMEMIK 107
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 60.1 bits (139), Expect = 1e-07
Identities = 40/91 (43%), Positives = 45/91 (49%)
Frame = +3
Query: 816 RGEAVCVLGALPXPRSLTRCARSFGCGERYQLTQRR*YGYPXNQGIXQEXTCXXXASKXP 995
R +C G +P PRSLTR ARSFGCGERY+LT G E T + +
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDTRKTLSKEE- 76
Query: 996 GTVKRPXXWRFXIGSAPLXSXXKIDXXXXGG 1088
RP RF IGSAPL S K D GG
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGG 104
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 1e-06
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 360 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 54.8 bits (126), Expect = 4e-06
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +3
Query: 177 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERRDN 350
+ F NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E +
Sbjct: 26 IDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNK 85
Query: 351 YVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 446
S E + VD +TK M+K L F N N
Sbjct: 86 ESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 53.2 bits (122), Expect = 1e-05
Identities = 30/57 (52%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 792 CINESANARGEAVCVLGALPXPRSLTRCARSFGCGERYQL-TQRR*YGYPXNQGIXQ 959
CI + A AR EAV VL ALP RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 50.8 bits (116), Expect = 6e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 287
F+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 28 FETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -3
Query: 971 TCXFLRYPLIXWITVLPPLSELIPL 897
TC F YPLI WITVLPPLSEL PL
Sbjct: 26 TCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 43.6 bits (98), Expect = 0.010
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATH 269
F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 22 FHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.022
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 595 DPDMIRYIDEXGQTTTRMQ 651
DPDMIRYIDE GQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 42.3 bits (95), Expect = 0.022
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 275
FDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 28 FDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.069
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 790 SALMNRPTRGERRFAYW 840
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 40.7 bits (91), Expect = 0.069
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPE 362
F+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE + Y+
Sbjct: 28 FELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEITMTDEEEYIRR 85
Query: 363 V 365
+
Sbjct: 86 I 86
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 40.7 bits (91), Expect = 0.069
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 305
F+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 28 FEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.16
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -1
Query: 844 APNTQTASPRALADSLMQ 791
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 39.1 bits (87), Expect = 0.21
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERER 341
F+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E R
Sbjct: 28 FEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR 80
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 38.3 bits (85), Expect = 0.37
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 908 AHSKAVIRLSTXSGDXAGXNM 970
AHSKAVIRLST SGD AG NM
Sbjct: 39 AHSKAVIRLSTESGDNAGKNM 59
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 1.5
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 300 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 476
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 35.9 bits (79), Expect = 2.0
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 195 KRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEEERERRDNYVPEVSA 371
K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D V
Sbjct: 49 KDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKDIVCQNVGF 106
Query: 372 LEHDIIEVDP 401
L+ +++ +P
Sbjct: 107 LQINMLMSEP 116
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 35.9 bits (79), Expect = 2.0
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIKLQEEERERRDN 350
F NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K E+E +
Sbjct: 23 FADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASKSLEQEAQVEPE 82
Query: 351 YVPEVSALEHDIIEVDPDTK 410
V E E P+T+
Sbjct: 83 PVEATENTEAPAAEETPETE 102
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.1 bits (77), Expect = 3.4
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 281
FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 28 FDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 34.7 bits (76), Expect = 4.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFAT 266
FD NK++ EI I +K +RN++AG+ T
Sbjct: 27 FDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 34.7 bits (76), Expect = 4.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 183 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 275
F+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 28 FEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_A2F4D0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 405
Score = 34.3 bits (75), Expect = 6.0
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 198 RICEEIA-IIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA- 371
RIC I ++ +P+ + G L +R++ + + +K + EE +++ E S
Sbjct: 104 RICPVIRELLDARPVTARTGGDIRQLEKRIQELEKKNAELKKENEENKKKLRAKSESSQS 163
Query: 372 --LEHDIIEVDPDTKDMLKMLDFNNINGLQ 455
LE + + PD KD+++ + N+ +Q
Sbjct: 164 KDLEEKLFLLLPDEKDIVEASESGNLKAVQ 193
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 7.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 673 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 840
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,581,211
Number of Sequences: 1657284
Number of extensions: 14947709
Number of successful extensions: 33867
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 32766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33857
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 113033143954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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