Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K23
         (1144 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            115   8e-26
10_07_0174 + 13815478-13815903                                        114   1e-25
03_02_0943 + 12598616-12598789,12599790-12601250                       31   1.3  
06_01_0889 - 6807449-6809257                                           30   3.9  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  115 bits (276), Expect = 8e-26
 Identities = 56/97 (57%), Positives = 75/97 (77%)
 Frame = +3

Query: 177 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 356
           L F TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRGIS+KLQEEERERR ++V
Sbjct: 26  LDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85

Query: 357 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 467
           P+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 86  PDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  114 bits (275), Expect = 1e-25
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +3

Query: 177 LXFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYV 356
           L F TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRGIS+KLQEEERERR ++V
Sbjct: 26  LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85

Query: 357 PEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 464
           PE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 86  PEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


>03_02_0943 + 12598616-12598789,12599790-12601250
          Length = 544

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = +3

Query: 252 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 431
           A +++HL+RR+        + K Q EE ++  +   + + LEHD+I  + +T D+LK L+
Sbjct: 41  AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96


>06_01_0889 - 6807449-6809257
          Length = 602

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 282 LRHSQVRGI-SIKLQEEERERRDNYVPEVSALEHDIIEVDPD 404
           LRH Q R I ++ +    R R + YVP+     HD+ E D +
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKE 528


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,061,800
Number of Sequences: 37544
Number of extensions: 412579
Number of successful extensions: 909
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)