Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K22
         (1197 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    29   6.5  

>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 22/97 (22%), Positives = 36/97 (37%)
 Frame = -2

Query: 953 NPXYQGXXPVAISXVLPGWTQDDSYRIRXXGRAERGVXAHSPAWXERPTPN*DTYSVSYE 774
           NP  +   P A+  V         YR    G  ++    H  AW  R  P    ++ +  
Sbjct: 59  NPLGEQRTPQAVRSVPKDGYSLFRYRRMVFGAKDQ--LKHDKAWNNRSLPQKSRWNQASV 116

Query: 773 KAPRFPKGERRTGIR*AAGSEQXXARGSFQGETPGXF 663
           K  ++ K E + G     G+E+       +G+T   F
Sbjct: 117 KLAQYQKAEEKMGFIKVFGTEEFQNYSKRRGQTRNSF 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,438,847
Number of Sequences: 27780
Number of extensions: 204631
Number of successful extensions: 280
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3286854270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)