Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K21
(1153 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.38
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.38
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.88
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 1.1
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.5
Z74027-2|CAA98420.1| 210|Caenorhabditis elegans Hypothetical pr... 30 3.5
AF324058-1|AAK01419.1| 210|Caenorhabditis elegans Ly-6-related ... 30 3.5
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 25 5.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 6.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 24 7.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 8.2
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -2
Query: 1017 PXPXPXXXXXXSXXXXXXXPXXQPPXPXXXRXIXXXKPPPPPPXP 883
P P P + P PP P + PPPPPP P
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -2
Query: 1017 PXPXPXXXXXXSXXXXXXXPXXQPPXPXXXRXIXXXKPPPPPPXP 883
P P P + P PP P + PPPPPP P
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.88
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 960 PXXQPPXPXXXRXIXXXKPPPPPPXPXT 877
P PP P + PPPPPP P T
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPT 94
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPP 748
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPP 764
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPP 748
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPP 764
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 769 PPPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPP 331
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPP 889
PP P I PPPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPP 347
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 352 PPPPPPPP 359
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 353 PPPPPPPP 360
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 951 QPPXPXXXRXIXXXKPPPPPPXP 883
QPP P I PPPPPP P
Sbjct: 70 QPPQPYAQSPIAAVPPPPPPPPP 92
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 960 PXXQPPXPXXXRXIXXXKPPPPPPXP 883
P PP P + + PPPPPP P
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPP 584
>Z74027-2|CAA98420.1| 210|Caenorhabditis elegans Hypothetical
protein C13G3.2 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 509 RILLTYFNMISFEYVICICKNVYYNIFQFVKI 604
R L Y N +S +YV+C C Y N + ++
Sbjct: 126 RSLPMYSNTVSMDYVVCTCNGDYCNTMEMPEV 157
>AF324058-1|AAK01419.1| 210|Caenorhabditis elegans Ly-6-related
protein HOT-6 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 509 RILLTYFNMISFEYVICICKNVYYNIFQFVKI 604
R L Y N +S +YV+C C Y N + ++
Sbjct: 126 RSLPMYSNTVSMDYVVCTCNGDYCNTMEMPEV 157
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 25.4 bits (53), Expect(2) = 5.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 906 PPPPPPXPXTXN 871
PPPPPP P + N
Sbjct: 71 PPPPPPKPSSDN 82
Score = 22.2 bits (45), Expect(2) = 5.4
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -2
Query: 945 PXPXXXRXIXXXKPPPPPP 889
P P PPPPPP
Sbjct: 57 PTPLTPAITPCEAPPPPPP 75
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPPXP 883
PP P I PPPPPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 948 PPXPXXXRXIXXXKPPPPPPXP 883
PP P I PPPPPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 12/43 (27%), Positives = 13/43 (30%)
Frame = -2
Query: 1017 PXPXPXXXXXXSXXXXXXXPXXQPPXPXXXRXIXXXKPPPPPP 889
P P P P PP + PPPPPP
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 23.4 bits (48), Expect(2) = 7.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 906 PPPPPPXP 883
PPPPPP P
Sbjct: 65 PPPPPPPP 72
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 960 PXXQPPXPXXXRXIXXXKPPPPPPXP 883
P PP P PPPPPP P
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPP 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,874
Number of Sequences: 27780
Number of extensions: 243330
Number of successful extensions: 2030
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3130337400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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