Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K18
(1182 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 197 3e-51
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 73 6e-14
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 71 4e-13
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 65 2e-11
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 65 2e-11
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 58 2e-09
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 58 3e-09
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 55 2e-08
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 54 5e-08
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 52 2e-07
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 50 8e-07
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 43 1e-04
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 38 0.004
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 30 0.72
SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol pyrop... 27 3.8
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 27 3.8
SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.1
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 27 5.1
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 5.1
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 197 bits (480), Expect = 3e-51
Identities = 93/190 (48%), Positives = 124/190 (65%), Gaps = 2/190 (1%)
Frame = +2
Query: 227 GATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREF 406
GA L ++YL L+ +PV V A+P NILEWHY++ GP +PYEGG YHG +IFP ++
Sbjct: 5 GAYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDY 64
Query: 407 PFKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGS 586
PFKPP+I MITP+GRF+TNTRLCLS +DFHP +WNP+W +STIL GL+SFM T G
Sbjct: 65 PFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEITTGG 124
Query: 587 IETSEYQKRCLAAESLEINI-KNKMFCELFPEYVEEIEQQL-KQRQEAMLLNQDSGANEV 760
I TSE +R A ++ NI N F +FPE +++ + + K EA L+ ++
Sbjct: 125 IVTSESTRRTYAKDTKRFNIMDNPKFLIMFPELIDKNREDIAKAAAEAALIE----PQQI 180
Query: 761 TSEPQSSMNC 790
S P SS C
Sbjct: 181 HSTPVSSNEC 190
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 73.3 bits (172), Expect = 6e-14
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
A + ++ L DP +A PV ++ W + GP SPY GG + I FP ++P
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYP 61
Query: 410 FKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
FKPP + T + +N +CL D D W+PA +IS +L + S + + P
Sbjct: 62 FKPPKVNFTTRIYHPNINSNGSICL---DILRDQWSPALTISKVLLSICSLLTDPNP 115
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 70.5 bits (165), Expect = 4e-13
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
A L +D+ R++ DP V+A PV N++ W+ V+ GP +P+E G + + F ++P
Sbjct: 5 ARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYP 64
Query: 410 FKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFM 559
KPP + ++ + N LCL I + W+P + ++ ILT + S +
Sbjct: 65 NKPPLVKFVSTMFHPNVYANGELCLDILQ---NRWSPTYDVAAILTSIQSLL 113
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = +2
Query: 242 LKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPP 421
L ++Y L+ P+P + V N+ W GP S Y GG +H + FP ++PF+PP
Sbjct: 12 LTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPP 71
Query: 422 SIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
+I T + F + +CL+I + P+ + ++L +L + E P
Sbjct: 72 TIEFTTRIYHPNFDSEGNVCLAI--LKQQVFKPSIKLRSVLEQILQLLREPNP 122
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 64.9 bits (151), Expect = 2e-11
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 263 LKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP 442
L DP P + A P N+ + ++GP++S YEGG +H ++ P E+P PP++ +T
Sbjct: 14 LTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTK 73
Query: 443 --NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
+ R+CLS W+PA I T+L + + M P
Sbjct: 74 IYHPNVDKLGRICLSTL---KKDWSPALQIRTVLLSIQALMGAPNP 116
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 58.4 bits (135), Expect = 2e-09
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +2
Query: 311 NILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIY----MITPNGRFKTNTRLCL 478
++ W V++GP ++PYEGG + I +P PPS+Y ++ PN + TN +C+
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISW-TNGEVCM 91
Query: 479 SITDFHPDTWNPAWSISTILTGLLSFM 559
I H W+PAWS+ + ++S +
Sbjct: 92 DILKTH---WSPAWSLQSACLAIISLL 115
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 57.6 bits (133), Expect = 3e-09
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +2
Query: 233 TSXLKQDYLRLKHDPVPYVTAEP-VPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
T L+ + + L P ++A P SN+L W + GP + YEG + + FP +P
Sbjct: 30 TKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYP 89
Query: 410 FKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLE 565
+ PP+I +P + + +CL D D W+ +++ TIL L S + E
Sbjct: 90 YSPPTIIFTSPMWHPNVDMSGNICL---DILKDKWSAVYNVQTILLSLQSLLGE 140
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 54.8 bits (126), Expect = 2e-08
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Frame = +2
Query: 311 NILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 484
+I EW ++ GPE + YEGG++H + FP+++P PP + T + N +C+SI
Sbjct: 34 SIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISI 93
Query: 485 TDFHP------------DTWNPAWSISTILTGLLSFM 559
HP + W P S TIL ++S +
Sbjct: 94 --LHPPGDDKYGYEDAGERWLPVHSPETILISVISML 128
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 53.6 bits (123), Expect = 5e-08
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 338 KGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT----PNGRFKTNTRLCLSITDFHPDT 505
+GPE +PYEGGY+ I P ++PF+PP + T PN +T +CL D D
Sbjct: 41 RGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGA-ICL---DILKDQ 96
Query: 506 WNPAWSISTILTGLLSFMLEKTPT 577
W+P +++ + L L S + P+
Sbjct: 97 WSPVYTMKSALISLQSLLCTPEPS 120
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPV-PSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREF 406
A L ++Y L + +TA P + W +++GP+ +P+EGG Y + FP ++
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 407 PFKPPSI----YMITPNGRFKTNTRLCLSIT----------DFHPDTWNPAWSISTILTG 544
P PP++ PN +K T +C+SI + + W+P S+ IL
Sbjct: 66 PLGPPTLKFECEFFHPN-VYKDGT-VCISILHAPGDDPNMYESSSERWSPVQSVEKILLS 123
Query: 545 LLSFMLEKTPTLGS 586
++S + E G+
Sbjct: 124 VMSMLAEPNDESGA 137
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 49.6 bits (113), Expect = 8e-07
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 311 NILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 484
+++ W + G K+ +EGG Y + FP E+P +PP P + + +CLSI
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 485 TDFHPDTWNPAWSISTILTGL 547
+ + W PA +I IL G+
Sbjct: 97 LN-EEEGWKPAITIKQILLGI 116
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +2
Query: 302 VPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITPNGRFKTN-TRLCL 478
V N+ E++ GP ++PY GG + + P E+P+K PSI + N F N L
Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFV--NRIFHPNIDELSG 82
Query: 479 SI-TDFHPDTWNPAWSISTILTGLLSFML 562
S+ D TW+P + + I L +L
Sbjct: 83 SVCLDVINQTWSPMFDMINIFEVFLPQLL 111
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +2
Query: 296 EPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT----PNGRFKTN 463
+P+ N+L H ++ P++ Y+GG + +I +P PP + + PN + N
Sbjct: 47 DPIKLNVL--HLEIR-PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGN 103
Query: 464 TRLCLSITDFHPDTWNPAWSISTILTGL 547
+CL+I WNP ++++IL GL
Sbjct: 104 --VCLNIL---RQDWNPVLNLNSILVGL 126
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 29.9 bits (64), Expect = 0.72
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 575 TLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAML---LNQDS 745
++ S +E + +++ +N + F + F + EE+E+Q+++ E ++ LN
Sbjct: 158 SINSASGTEIRTSLRSSKGKSVNYNEQEFYDDFEDEEEEVEEQVEEEYEPIIDFVLNHRK 217
Query: 746 GANEVTSEPQSSMNCIL 796
A+ +P+SS ++
Sbjct: 218 RADAQDDDPKSSYQYLI 234
>SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol
pyrophosphate phosphatase fusion 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 305 PSNILEWHYVVKGPEKSPYEG--GYYHGKIIFPREFPFK 415
PSN L ++V P S +G Y HGK +FP + FK
Sbjct: 311 PSNFLSTYFV--SPLVSAIDGTVDYLHGKSLFPEKRNFK 347
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 3.8
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 560 LEKTPTLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLK-----QRQEA 724
LEK L +I+ +EY+K+ + +KN++ EL Y E + QL +R +A
Sbjct: 63 LEKESLLDAIKNNEYEKQ--RDNNTIKRLKNEL--EL---YQNECQLQLNKVRTLERDQA 115
Query: 725 MLLNQDSGANEVTSEPQSSMNCILTNLFV 811
L+ Q+ G +V ++ + ++ + L V
Sbjct: 116 ELITQNKGLKDVNAKNELTLKALKNQLSV 144
>SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 805 QICQNTIHTRLWLRGYFICTTVL 737
++ +N +H RLW+ +F C VL
Sbjct: 216 KMLRNLLHKRLWISFFFACFVVL 238
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 320 EWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 439
+W+ + GP S +E Y KI +P PP + ++
Sbjct: 40 DWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVS 79
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 575 TLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAMLLNQD 742
T+ +E +KR L + LE+ + PE + + ++LK R+E+ + +D
Sbjct: 462 TIVDLENMYREKRNLVLDCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTED 517
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,026,590
Number of Sequences: 5004
Number of extensions: 83944
Number of successful extensions: 256
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 635506058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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