Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K18
(1182 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 228 7e-60
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 177 2e-44
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 135 7e-32
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 73 3e-13
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 73 3e-13
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 73 5e-13
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 73 5e-13
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 67 2e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 64 2e-10
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 56 5e-08
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 54 2e-07
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 52 8e-07
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 49 6e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 49 6e-06
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 47 2e-05
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 47 2e-05
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 47 3e-05
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 44 3e-04
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 39 0.006
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 36 0.056
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 34 0.23
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 34 0.23
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 33 0.39
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 31 1.6
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 30 2.8
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 29 4.8
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 29 4.8
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 29 6.4
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 29 6.4
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 29 6.4
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 29 8.5
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 8.5
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 228 bits (557), Expect = 7e-60
Identities = 94/167 (56%), Positives = 133/167 (79%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
A LK+DY RL +PVP++ A P+ +NILEW Y++ G K+PYEGG Y GK++FP++FP
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFP 68
Query: 410 FKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGSI 589
FKPP+I M+TPNGRF+TNTRLCLSI+D+HPDTWNPAW++STI+TGL+SFM + PTLGS+
Sbjct: 69 FKPPAILMLTPNGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQPTLGSL 128
Query: 590 ETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAML 730
TSE +++ LA +S + N+K+K FC LFPE ++I +++++ + L
Sbjct: 129 VTSESERKLLAKKSKQWNLKDKSFCALFPEEADQIREEMEKMNQQEL 175
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 177 bits (430), Expect = 2e-44
Identities = 79/152 (51%), Positives = 102/152 (67%)
Frame = +2
Query: 194 IHVXMAKTKVXGATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGY 373
+ V A T A L++DY +L DPV + A P NILEWHY ++G +P+ GGY
Sbjct: 8 VSVPAAGTASSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGY 67
Query: 374 YHGKIIFPREFPFKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLS 553
Y GK+IF FP+ PP+I MITPNGRF+TNTRLCLSI+D+HP++WNP W++S IL GL S
Sbjct: 68 YWGKVIFKENFPWSPPAITMITPNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHS 127
Query: 554 FMLEKTPTLGSIETSEYQKRCLAAESLEINIK 649
FM E +P GSI + +R AA S E N+K
Sbjct: 128 FMNENSPAAGSIAGTPQDQRMYAAASKEFNVK 159
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 135 bits (326), Expect = 7e-32
Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Frame = +2
Query: 215 TKVXGATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIF 394
TK G +K+ + L+ P A+P+ N+ EWH+ ++G + +EGG YHG+IIF
Sbjct: 7 TKNAGVRRLMKEA-MELRQ-PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIF 64
Query: 395 PREFPFKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
P ++P KPP++ ++TPNGRF+ N ++CLSI+ +HP+TW P+WSI T L L+ F L TP
Sbjct: 65 PADYPMKPPNLILLTPNGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGF-LPSTP 123
Query: 575 --TLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQ-QLKQRQEAMLL 733
LGS++ +++ LA S E K + C + + E QLKQ +EA L
Sbjct: 124 GGALGSLDYPPKERQRLAKLSCEWKCK-ECGCVMKTALLPITEDGQLKQTEEAKTL 178
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 73.3 bits (172), Expect = 3e-13
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
A ++++ L DP +A PV ++ W + GP +SPY+GG + I FP ++P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 410 FKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
FKPP + T + +N +CL D W+PA +IS +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 73.3 bits (172), Expect = 3e-13
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFP 409
A ++++ L DP +A PV ++ W + GP +SPY+GG + I FP ++P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 410 FKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
FKPP + T + +N +CL D W+PA +IS +L + S + + P
Sbjct: 62 FKPPKVAFTTRIYHPNINSNGSICL---DILRSQWSPALTISKVLLSICSLLCDPNP 115
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +2
Query: 242 LKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPP 421
L +D+ +L+ DP V+ P NIL W ++ GP+++P+E G + + F E+P KPP
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPP 68
Query: 422 SIYMITPNGRFKTNTRLCLSI-TDFHPDTWNPAWSISTILTGLLSFMLEKTPT--LGSIE 592
++ I+ F N SI D + W+P + ++ ILT + S + E P S+
Sbjct: 69 TVKFISK--MFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 593 TSEYQK 610
YQ+
Sbjct: 127 AQLYQE 132
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 72.5 bits (170), Expect = 5e-13
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +2
Query: 242 LKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPP 421
L +D+ +L+ DP V+ P NIL W ++ GP+++P+E G + + F E+P KPP
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPP 68
Query: 422 SIYMITPNGRFKTNTRLCLSI-TDFHPDTWNPAWSISTILTGLLSFMLEKTPT--LGSIE 592
++ I+ F N SI D + W+P + ++ ILT + S + E P S+
Sbjct: 69 TVKFISK--MFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 593 TSEYQK 610
YQ+
Sbjct: 127 AQLYQE 132
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +2
Query: 260 RLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 439
RL DPVP ++A P SN +H ++ GP+ SP+ GG + ++ P E+P P + +T
Sbjct: 15 RLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMT 74
Query: 440 P--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
+ R+CL D D W+PA I T+L + + + P
Sbjct: 75 KIYHPNIDKLGRICL---DILKDKWSPALQIRTVLLSIQALLSAPNP 118
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 64.1 bits (149), Expect = 2e-10
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Frame = +2
Query: 227 GATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREF 406
GA L + L+ PV T + N+ W + GP K+ Y+GGY+ I FP +
Sbjct: 10 GALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNY 69
Query: 407 PFKPPSIYMITP--NGRFKTNTRLCLSIT----------DFHPDTWNPAWSISTILTGLL 550
P+ PPS+ T + N LC+SI + + WNP S+ TIL ++
Sbjct: 70 PYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVI 129
Query: 551 SFMLE-KTPTLGSIETS 598
S + E T + +++ S
Sbjct: 130 SLLNEPNTSSPANVDAS 146
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 56.0 bits (129), Expect = 5e-08
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVP-YVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREF 406
AT L+++ LK+ V Y E +N+L+W V+ P+K PY G + I FP ++
Sbjct: 3 ATRRLQKELGDLKNCGVKAYENVECEETNLLKWT-VLLIPDKEPYNKGAFKVGITFPVDY 61
Query: 407 PFKPPSIYMITP--NGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTPT- 577
PFKPP + T + + CL I + W PA ++ LLS + E P+
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVT--AENWKPATKTEQVMMALLSLINEPEPSH 119
Query: 578 -LGSIETSEYQK 610
+ + E+QK
Sbjct: 120 PIRADVAEEFQK 131
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPS-NILEWHYVVKGPEKSPYEGGYYHGKIIFPREF 406
A L +Y L P + A P+ N EW ++ GPE++ + G + +I FP+++
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 407 PFKPPSIYMITPNGRFKTNT----RLCLSIT----------DFHPDTWNPAWSISTILTG 544
P PP + G F N R+C+SI + + W+P SI IL
Sbjct: 65 PLSPPKMRFTC--GIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLS 122
Query: 545 LLSFMLE 565
++S + E
Sbjct: 123 VVSMLAE 129
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 52.0 bits (119), Expect = 8e-07
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Frame = +2
Query: 242 LKQDYLRLKHDPVPYVTAEPVPSN-ILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKP 418
LK+ ++ PV +A V N I +W +V GP + YEGG++ + FPR++P KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 419 PSIYMITP--NGRFKTNTRLCLSIT-DFHPDTWN---------PAWSISTILTGLLSFML 562
P + I+ + +C+SI D D W P ++ TIL ++S +
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 563 E 565
+
Sbjct: 128 D 128
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +2
Query: 311 NILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 484
N+ W + G + + +EGG Y +++F +FP PP P + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 485 TDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESLEINIKNK 655
D + D W P+ SI +L G+ +L + YQ C E +K +
Sbjct: 97 LDENKD-WKPSISIKQLLIGIQD-LLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKE 151
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 49.2 bits (112), Expect = 6e-06
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +2
Query: 311 NILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 484
N+ W + G + + +EGG Y +++F +FP PP P + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 485 TDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESLEINIKNK 655
D + D W P+ SI +L G+ +L + YQ C E +K +
Sbjct: 97 LDENKD-WKPSISIKQLLIGIQD-LLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKE 151
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Frame = +2
Query: 332 VVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP---NGRFKTNT----RLCLSIT- 487
++ GP+ +PY G + I FP +PF PP +T N RF N ++CLSI
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILG 507
Query: 488 --DFHP-DTWNPAWSISTILTGL 547
+ P + WNP S+ +L +
Sbjct: 508 TWEGRPEEKWNPYCSLMQVLVSI 530
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/96 (23%), Positives = 44/96 (45%)
Frame = +2
Query: 287 VTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITPNGRFKTNT 466
+ E + N+ E ++GP +PY GG + I P ++PF PP++ T ++
Sbjct: 27 IMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSS 86
Query: 467 RLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
+ + D D W + ++ T+L + + M P
Sbjct: 87 QTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEP 122
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 46.8 bits (106), Expect = 3e-05
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHD-PVPYVTAEPVPSNIL-EWHYVVKGPEKSPYEGGYYHGKIIFPRE 403
AT L ++ +LK + P + SN L +W V G E + Y G + + F +
Sbjct: 5 ATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQ 64
Query: 404 FPFKPPSIYM----ITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKT 571
+PF P + I + +N +CLSI D W PA S+ ++ +LS +
Sbjct: 65 YPFNSPEVMFVGETIPAHPHIYSNGHICLSILS---DDWTPALSVQSVCLSILSMLSSSK 121
Query: 572 PTLGSIETSEYQKRC 616
I+ + Y + C
Sbjct: 122 EKKHPIDDAIYVRTC 136
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 43.6 bits (98), Expect = 3e-04
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 308 SNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSI 427
+N+++ +KGPE +PY GG + K+ P +PF+PP +
Sbjct: 48 NNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 39.1 bits (87), Expect = 0.006
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 332 VVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 439
++KG E++PYEGG + I +PFK P++ IT
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFIT 419
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 35.9 bits (79), Expect = 0.056
Identities = 23/86 (26%), Positives = 37/86 (43%)
Frame = +2
Query: 323 WHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITPNGRFKTNTRLCLSITDFHPD 502
W V GP SP+EGG Y + F ++P PP TP + R + + +
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 503 TWNPAWSISTILTGLLSFMLEKTPTL 580
W+ S+ +L + + + TP L
Sbjct: 130 HWSSETSLKKLLREISNLL--ATPDL 153
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 33.9 bits (74), Expect = 0.23
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 344 PEKSPYEGGYYHGKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI---TDFHPDTW 508
P++ Y GG + KI P E+ PP + +T + + +CLSI W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 509 NPAWSISTILTGLLS 553
P +++ ++ GL+S
Sbjct: 127 RPTRNLTDVVHGLVS 141
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +2
Query: 341 GPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT----PNGRFKTNTRLCLSITDFHPDTW 508
GP+ + YE G + ++ P ++PFK PSI + PN + T +CL + + W
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGT-VCLDVIN---QAW 96
Query: 509 NPAWSISTILTGLLSFML 562
+ ++ I L +L
Sbjct: 97 TALYDLTNIFDTFLPQLL 114
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 819 ATRTNRFVKIQFILDCGSEVTSFAP-LS*FNNIASCRCFNCCSISSTYSGNNSQNI 655
++ T + + I + CG E+T P + N I CF C S T +G + NI
Sbjct: 399 SSTTRKIMNINICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNI 454
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 33.1 bits (72), Expect = 0.39
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 230 ATSXLKQDYLRLKHDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYY 376
A ++++ L DP + V ++ W + GP +SPY+GG +
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIF 50
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 401 EFPFKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP 574
++P + P++ ++ P G K + + L+I DTW I+ + + F+ + TP
Sbjct: 83 DYPQRKPAVDLLDPQGLSKEDVQNLLTILRQMADTWEGCVVIAELAHRVREFLTDHTP 140
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 314 ILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 439
+ W + GP ++PYE Y+ +I +P +PP++ T
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTT 79
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 142 ICSQTFYSKHCKHSKVNNSCXHG 210
+CSQ F+ +C++ K + +C HG
Sbjct: 79 MCSQGFFGTYCEYCKPSTTCKHG 101
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 29.5 bits (63), Expect = 4.8
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Frame = +2
Query: 542 GLLSFMLEKTPTLGSIETSEYQKRCLAAESLE------INIKNKMFC----ELFP-EYVE 688
G LSF + T L IE +R ESLE I +K+K +LF + +E
Sbjct: 493 GNLSFDEKNTLPL-EIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIE 551
Query: 689 EIEQQLKQRQEAMLLNQDSGANEV 760
E++QQ++ QE +L NQ+ + +V
Sbjct: 552 ELQQQIEDLQENLLKNQEHASGDV 575
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 29.5 bits (63), Expect = 4.8
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Frame = +2
Query: 542 GLLSFMLEKTPTLGSIETSEYQKRCLAAESLE------INIKNKMFC----ELFP-EYVE 688
G LSF + T L IE +R ESLE I +K+K +LF + +E
Sbjct: 493 GNLSFDEKNTLPL-EIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIE 551
Query: 689 EIEQQLKQRQEAMLLNQDSGANEV 760
E++QQ++ QE +L NQ+ + +V
Sbjct: 552 ELQQQIEDLQENLLKNQEHASGDV 575
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 617 LAAESLEINIKNKMFCE--LFP-EYVEEIEQQLKQRQEAMLLNQDSGANEV 760
L E + + KN + E LF + +EE++QQ++ QE +L NQ+ + +V
Sbjct: 528 LKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQEHASGDV 578
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 617 LAAESLEINIKNKMFCE--LFP-EYVEEIEQQLKQRQEAMLLNQDSGANEV 760
L E + + KN + E LF + +EE++QQ++ QE +L NQ+ + +V
Sbjct: 528 LKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQEHASGDV 578
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 617 LAAESLEINIKNKMFCE--LFP-EYVEEIEQQLKQRQEAMLLNQDSGANEV 760
L E + + KN + E LF + +EE++QQ++ QE +L NQ+ + +V
Sbjct: 528 LKGELITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLKNQEHASGDV 578
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 335 VKGPEKSPYEGGYYHGKIIFPREFPFKPPSI 427
+ GP +PYE G + + FP +P P I
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQI 65
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 674 PEYVEEIEQQLK-QRQEAMLLNQDSGANEVTSEPQSSMNCILTNL 805
P+ VE++ Q++ QRQ+ + + G +T+ PQ+ + L NL
Sbjct: 306 PQVVEQLISQVRMQRQQQEQNSMEQGQQRITAPPQTPQSQNLANL 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,392,852
Number of Sequences: 27780
Number of extensions: 478118
Number of successful extensions: 1446
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -