Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K17
         (1193 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0458 + 18406844-18408877                                         30   3.1  
05_03_0677 - 16863260-16863778                                         29   9.5  
03_06_0713 - 35687672-35689219                                         29   9.5  
02_05_0633 - 30492742-30492987,30493082-30494194                       29   9.5  

>07_03_0458 + 18406844-18408877
          Length = 677

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -1

Query: 689 TIHARSLWQHLAFVHLKRQSRFNICSAARHQRCCSDVVRPRSPLHRHNGIDL 534
           ++ A  +W+ +    + +QSR   C+ A+   CC D V     ++++  I L
Sbjct: 407 SVEADEIWKEMFLYEMIKQSRIEHCNVAKLFGCCLDHVDAPVLVYKYGDIGL 458


>05_03_0677 - 16863260-16863778
          Length = 172

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 734 RGPAGRSGLYRRDADPERRGDGRLLRRAVDVR 829
           RG AG +G +RR     RRG GR + RA+  R
Sbjct: 46  RGAAGGAGRWRRGWRVRRRGLGRRILRALSPR 77


>03_06_0713 - 35687672-35689219
          Length = 515

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 617 CSAARHQRCCSDVVR--PRSPLHRHNGIDLTAASAPPGTARRTTLSPCH*HLNTHTR 453
           C+  R +R  +   R  P S  H H+G  LT  +APP  A + TL      L +H R
Sbjct: 12  CAIQRRRRSTAPARRRGPPSRRHPHSGAALTLRAAPP-PATQPTLDRVLSDLGSHPR 67


>02_05_0633 - 30492742-30492987,30493082-30494194
          Length = 452

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -1

Query: 644 LKRQSRFNICSAARHQRC--CSDVVRPRSPL-HRHNGIDLTAASAPPGTARRTTLSPCH* 474
           L+R++R+  C+A     C  C   V   +PL  RH  + L  +S PP TAR +       
Sbjct: 24  LRRRARW-YCAADDAFLCQGCDTSVHSANPLARRHERLRLRVSSPPPLTARASVEEEAAA 82

Query: 473 HLNTHTRARASTSRDVVCTLARTQTRT 393
            + T T   +     V    ++ + RT
Sbjct: 83  AVGTTTTTTSKREGGVTPAWSKRKART 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,193,765
Number of Sequences: 37544
Number of extensions: 539035
Number of successful extensions: 1414
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3643211076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)