Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K11
         (1187 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    26   1.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   4.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   5.7  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   7.6  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   7.6  

>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 463 FLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMD 579
           F V L T    YS+   EW+PPA      + D++++  D
Sbjct: 124 FEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFD 162


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 532 PQPFKVQSDL---QWYLMDPDAYDQFLVGIGTGVALQVWQ 642
           P P  ++ D    Q YL DP+A    +      V L+VWQ
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERAVTLEVWQ 881


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 330 CQRILPHDREWTHDWVHFPGIQ*PPECRRSRESDEQL 440
           C +++ H R   H  VHFPG    P CR +    + L
Sbjct: 505 CGKVVTHIRNHYH--VHFPGRFECPLCRATYTRSDNL 539


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 619 GVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 720
           G+A  +   AL +  +LQ  P+ TE     SP G
Sbjct: 346 GIATDILGKALRQQTVLQRTPSGTEPKTPTSPTG 379


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 830 GENDINLASGWKNFWNCENFGPAHSAT 750
           G N  + ++G+K+ WN  N G  + AT
Sbjct: 96  GNNGTDTSNGYKDVWNA-NSGATNGAT 121


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 830 GENDINLASGWKNFWNCENFGPAHSAT 750
           G N  + ++G+K+ WN  N G  + AT
Sbjct: 96  GNNGTDTSNGYKDVWNA-NSGATNGAT 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,081,831
Number of Sequences: 2352
Number of extensions: 23824
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134477763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)