Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_K11
(1187 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 294 5e-79
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 294 5e-79
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 294 5e-79
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 294 5e-79
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 285 2e-76
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 246 9e-65
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.38
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.38
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 36 0.38
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.38
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.38
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 36 0.38
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.38
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.38
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.38
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.38
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.38
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.38
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.50
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.50
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.50
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.50
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.50
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.50
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.50
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 34 0.88
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 34 0.88
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 34 0.88
BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein. 34 0.88
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 34 0.88
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 34 0.88
AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens ... 34 0.88
Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1 ... 33 1.5
U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein. 33 1.5
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 33 1.5
BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like ... 33 1.5
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 33 1.5
BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein. 33 1.5
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 33 1.5
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 33 1.5
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 33 1.5
AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X... 33 1.5
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 33 2.0
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 33 2.0
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 33 2.0
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 33 2.7
BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein. 33 2.7
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 33 2.7
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 33 2.7
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 33 2.7
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 33 2.7
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 33 2.7
AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation... 33 2.7
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 33 2.7
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 33 2.7
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 33 2.7
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 33 2.7
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 33 2.7
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 33 2.7
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt... 32 3.5
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein. 32 3.5
BC113421-1|AAI13422.1| 514|Homo sapiens transducin (beta)-like ... 32 3.5
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein. 32 3.5
AK022956-1|BAB14331.1| 514|Homo sapiens protein ( Homo sapiens ... 32 3.5
AF314544-1|AAK00301.1| 514|Homo sapiens nuclear receptor co-rep... 32 3.5
AF268193-1|AAG44736.1| 514|Homo sapiens IRA1 protein. 32 3.5
AF180682-1|AAF23609.1| 1280|Homo sapiens DNA (cytosine-5)-methyl... 32 3.5
AC010077-1|AAD54507.1| 966|Homo sapiens MTDM_HUMAN [AA 1- 966] ... 32 3.5
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy... 32 3.5
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 31 6.2
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 31 6.2
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 31 6.2
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 31 6.2
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 31 6.2
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 31 6.2
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 31 6.2
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 31 6.2
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 31 6.2
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 31 6.2
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 31 6.2
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 6.2
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 31 6.2
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 31 6.2
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 31 6.2
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 31 6.2
BC130473-1|AAI30474.1| 522|Homo sapiens transducin (beta)-like ... 31 8.2
BC130471-1|AAI30472.1| 522|Homo sapiens transducin (beta)-like ... 31 8.2
BC113118-1|AAI13119.1| 1028|Homo sapiens contactin 6 protein. 31 8.2
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 31 8.2
AF332222-1|AAK13474.1| 522|Homo sapiens transducin beta-like 1 ... 31 8.2
AF332221-1|AAK13473.1| 522|Homo sapiens transducin beta-like 1 ... 31 8.2
AF332220-1|AAK13472.1| 522|Homo sapiens transducin beta-like 1 ... 31 8.2
AB003592-1|BAA82612.1| 1028|Homo sapiens neural adhesion molecul... 31 8.2
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 294 bits (721), Expect = 5e-79
Identities = 137/258 (53%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
Frame = +1
Query: 208 PKESDGYENXXXXXGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 387
P+E+DG ++ PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFL
Sbjct: 177 PQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFL 235
Query: 388 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQW 567
EY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QPFK +L++
Sbjct: 236 EYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRY 295
Query: 568 YLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 747
+L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP GTYLATFH R
Sbjct: 296 WLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQR 355
Query: 748 GVALWAGPKFSQFQKFFHPEARFISFSPCENYIVTFSPSGDRGDD-KKLIIWDIRTGQEK 924
G+ALW G KF Q Q+F H + I FSPCE Y+VTFSP D DD + +IIWDI TG +K
Sbjct: 356 GIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKK 415
Query: 925 RSFPPPDEYVTWPIFRWS 978
R F + WPIF+WS
Sbjct: 416 RGF-HCESSAHWPIFKWS 432
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 981 DDRXFAXIGADVLSVYEXPGXGLLDKKS 1064
D + FA + D LS+YE P GLLDKKS
Sbjct: 434 DGKFFARMTLDTLSIYETPSMGLLDKKS 461
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 294 bits (721), Expect = 5e-79
Identities = 137/258 (53%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
Frame = +1
Query: 208 PKESDGYENXXXXXGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 387
P+E+DG ++ PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFL
Sbjct: 177 PQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFL 235
Query: 388 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQW 567
EY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QPFK +L++
Sbjct: 236 EYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRY 295
Query: 568 YLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 747
+L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP GTYLATFH R
Sbjct: 296 WLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQR 355
Query: 748 GVALWAGPKFSQFQKFFHPEARFISFSPCENYIVTFSPSGDRGDD-KKLIIWDIRTGQEK 924
G+ALW G KF Q Q+F H + I FSPCE Y+VTFSP D DD + +IIWDI TG +K
Sbjct: 356 GIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKK 415
Query: 925 RSFPPPDEYVTWPIFRWS 978
R F + WPIF+WS
Sbjct: 416 RGF-HCESSAHWPIFKWS 432
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 981 DDRXFAXIGADVLSVYEXPGXGLLDKKS 1064
D + FA + D LS+YE P GLLDKKS
Sbjct: 434 DGKFFARMTLDTLSIYETPSMGLLDKKS 461
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 294 bits (721), Expect = 5e-79
Identities = 137/258 (53%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
Frame = +1
Query: 208 PKESDGYENXXXXXGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 387
P+E+DG ++ PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFL
Sbjct: 177 PQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFL 235
Query: 388 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQW 567
EY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QPFK +L++
Sbjct: 236 EYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRY 295
Query: 568 YLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 747
+L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP GTYLATFH R
Sbjct: 296 WLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQR 355
Query: 748 GVALWAGPKFSQFQKFFHPEARFISFSPCENYIVTFSPSGDRGDD-KKLIIWDIRTGQEK 924
G+ALW G KF Q Q+F H + I FSPCE Y+VTFSP D DD + +IIWDI TG +K
Sbjct: 356 GIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKK 415
Query: 925 RSFPPPDEYVTWPIFRWS 978
R F + WPIF+WS
Sbjct: 416 RGF-HCESSAHWPIFKWS 432
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 981 DDRXFAXIGADVLSVYEXPGXGLLDKKS 1064
D + FA + D LS+YE P GLLDKKS
Sbjct: 434 DGKFFARMTLDTLSIYETPSMGLLDKKS 461
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 294 bits (721), Expect = 5e-79
Identities = 137/258 (53%), Positives = 178/258 (68%), Gaps = 1/258 (0%)
Frame = +1
Query: 208 PKESDGYENXXXXXGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 387
P+E+DG ++ PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFL
Sbjct: 177 PQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFL 235
Query: 388 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQW 567
EY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QPFK +L++
Sbjct: 236 EYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRY 295
Query: 568 YLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 747
+L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP GTYLATFH R
Sbjct: 296 WLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQR 355
Query: 748 GVALWAGPKFSQFQKFFHPEARFISFSPCENYIVTFSPSGDRGDD-KKLIIWDIRTGQEK 924
G+ALW G KF Q Q+F H + I FSPCE Y+VTFSP D DD + +IIWDI TG +K
Sbjct: 356 GIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKK 415
Query: 925 RSFPPPDEYVTWPIFRWS 978
R F + WPIF+WS
Sbjct: 416 RGF-HCESSAHWPIFKWS 432
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 981 DDRXFAXIGADVLSVYEXPGXGLLDKKS 1064
D + FA + D LS+YE P GLLDKKS
Sbjct: 434 DGKFFARMTLDTLSIYETPSMGLLDKKS 461
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 285 bits (699), Expect = 2e-76
Identities = 133/242 (54%), Positives = 170/242 (70%), Gaps = 1/242 (0%)
Frame = +1
Query: 256 PQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 435
PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK +
Sbjct: 2 PQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNAD 60
Query: 436 NCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIG 615
KLDKQHTF VNLFTDF KY I EW+ P QPFK +L+++L + + DQ+ V
Sbjct: 61 GYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFE 120
Query: 616 TGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALWAGPKFSQFQKF 795
+G ++ N + +P+ ++ER WTETY WSP GTYLATFH RG+ALW G KF Q Q+F
Sbjct: 121 SGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRF 180
Query: 796 FHPEARFISFSPCENYIVTFSPSGDRGDD-KKLIIWDIRTGQEKRSFPPPDEYVTWPIFR 972
H + I FSPCE Y+VTFSP D DD + +IIWDI TG +KR F + WPIF+
Sbjct: 181 SHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGF-HCESSAHWPIFK 239
Query: 973 WS 978
WS
Sbjct: 240 WS 241
Score = 36.7 bits (81), Expect = 0.16
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 981 DDRXFAXIGADVLSVYEXPGXGLLDKKS 1064
D + FA + D LS+YE P GLLDKKS
Sbjct: 243 DGKFFARMTLDTLSIYETPSMGLLDKKS 270
>AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein.
Length = 385
Score = 246 bits (603), Expect = 9e-65
Identities = 112/210 (53%), Positives = 147/210 (70%)
Frame = +1
Query: 208 PKESDGYENXXXXXGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFL 387
P+E+DG ++ PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFL
Sbjct: 177 PQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFL 235
Query: 388 EYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQW 567
EY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QPFK +L++
Sbjct: 236 EYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRY 295
Query: 568 YLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWR 747
+L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP GTYLATFH R
Sbjct: 296 WLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQR 355
Query: 748 GVALWAGPKFSQFQKFFHPEARFISFSPCE 837
G+ALW G KF Q Q+F H + I FSPCE
Sbjct: 356 GIALWGGEKFKQIQRFSHQGVQLIDFSPCE 385
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 18 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 77
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 78 QKKVERQAELKRKFE 92
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 154 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 213
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 214 AVLAPWPR--PPPRRFSPP 230
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 100 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 159
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 160 AVLAPWPR--PPPRRFSPP 176
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.50
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 471
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 472 NLFTDFQKYSDIPKEWEPP 528
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.88
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 241
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 242 QKKVERQTELKRKFE 256
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.88
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.88
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC033864-1|AAH33864.1| 320|Homo sapiens BCAT1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.88
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 592 DQFLVGIGTGVALQVWQNAL-PEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALWAG 768
DQ V T +L + + EP L ++P + + SP+G Y ++ + V+LWA
Sbjct: 147 DQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWAN 206
Query: 769 PKF 777
PK+
Sbjct: 207 PKY 209
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.88
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.88
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>AK056255-1|BAB71129.1| 386|Homo sapiens protein ( Homo sapiens
cDNA FLJ31693 fis, clone NT2RI2005710, highly similar to
BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, CYTOSOLIC
(EC ).
Length = 386
Score = 34.3 bits (75), Expect = 0.88
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 592 DQFLVGIGTGVALQVWQNAL-PEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALWAG 768
DQ V T +L + + EP L ++P + + SP+G Y ++ + V+LWA
Sbjct: 148 DQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWAN 207
Query: 769 PKF 777
PK+
Sbjct: 208 PKY 210
>Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1
protein protein.
Length = 577
Score = 33.5 bits (73), Expect = 1.5
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ NYI++ G
Sbjct: 296 WNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS------AGV 349
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 350 DKTTIIWDAHTGEAKQQFP 368
>U21551-1|AAB08528.1| 384|Homo sapiens ECA39 protein.
Length = 384
Score = 33.5 bits (73), Expect = 1.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 592 DQFLVGIGTGVALQVWQNAL-PEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALWAG 768
DQ V T +L + + EP L ++P + + SP+G Y ++ + V+LWA
Sbjct: 146 DQEWVPYSTSASLYIRPAFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWAN 205
Query: 769 PKF 777
PK+
Sbjct: 206 PKY 208
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like
1X-linked protein.
Length = 577
Score = 33.5 bits (73), Expect = 1.5
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ NYI++ G
Sbjct: 296 WNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS------AGV 349
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 350 DKTTIIWDAHTGEAKQQFP 368
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein.
Length = 526
Score = 33.5 bits (73), Expect = 1.5
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ NYI++ G
Sbjct: 245 WNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS------AGV 298
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 299 DKTTIIWDAHTGEAKQQFP 317
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 477
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 478 FTDFQKYSDIPKEWE 522
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X
variant protein.
Length = 540
Score = 33.5 bits (73), Expect = 1.5
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ NYI++ G
Sbjct: 259 WNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILS------AGV 312
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 313 DKTTIIWDAHTGEAKQQFP 331
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 289 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 444
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 289 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 444
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 289 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 444
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein.
Length = 122
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 54 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 113
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 114 KVEAKNAIKQLNNYEI 129
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation
factor protein.
Length = 201
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 54 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 113
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 114 KVEAKNAIKQLNNYEI 129
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 29 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 88
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 89 KVEAKNAIKQLNNYEI 104
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G++ GC +G + + + + K GKI NG GY F+ +SN
Sbjct: 46 GWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSN 105
Query: 400 PQNAAEAVKATNNCKL 447
A A+K NN ++
Sbjct: 106 KVEAKNAIKQLNNYEI 121
>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
(cytosine-5-)-methyltransferase protein.
Length = 1616
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 896 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 953
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 954 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 993
>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
Length = 1632
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 912 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 969
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 970 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 1009
>BC113421-1|AAI13422.1| 514|Homo sapiens transducin (beta)-like
1X-linked receptor 1 protein.
Length = 514
Score = 32.3 bits (70), Expect = 3.5
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ N+I++ G
Sbjct: 233 WNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILS------AGV 286
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 287 DKTTIIWDAHTGEAKQQFP 305
>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
Length = 1511
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 791 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 848
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 849 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 888
>AK022956-1|BAB14331.1| 514|Homo sapiens protein ( Homo sapiens
cDNA FLJ12894 fis, clone NT2RP2004170, moderately
similar to Homo sapiens mRNA for transducin (beta) like
1 protein. ).
Length = 514
Score = 32.3 bits (70), Expect = 3.5
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ N+I++ G
Sbjct: 233 WNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILS------AGV 286
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 287 DKTTIIWDAHTGEAKQQFP 305
>AF314544-1|AAK00301.1| 514|Homo sapiens nuclear receptor
co-repressor/HDAC3 complex subunit TBLR1 protein.
Length = 514
Score = 32.3 bits (70), Expect = 3.5
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ N+I++ G
Sbjct: 233 WNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILS------AGV 286
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 287 DKTTIIWDAHTGEAKQQFP 305
>AF268193-1|AAG44736.1| 514|Homo sapiens IRA1 protein.
Length = 514
Score = 32.3 bits (70), Expect = 3.5
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 706 WSPLGTYLATFHWRGVA-LWAGPKFSQFQKFFHPEARF-ISFSPCENYIVTFSPSGDRGD 879
W+ GT LAT + G A +W H F + ++ N+I++ G
Sbjct: 233 WNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILS------AGV 286
Query: 880 DKKLIIWDIRTGQEKRSFP 936
DK IIWD TG+ K+ FP
Sbjct: 287 DKTTIIWDAHTGEAKQQFP 305
>AF180682-1|AAF23609.1| 1280|Homo sapiens DNA
(cytosine-5)-methyltransferase protein.
Length = 1280
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 560 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 617
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 618 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 657
>AC010077-1|AAD54507.1| 966|Homo sapiens MTDM_HUMAN [AA 1- 966]
protein.
Length = 966
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 775 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 832
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 833 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 872
>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
(cytosine-5-)-methyltransferase 1 variant protein.
Length = 1606
Score = 32.3 bits (70), Expect = 3.5
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 253 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 432
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 883 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 940
Query: 433 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 549
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 941 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 980
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 224 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 278
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein
MGC27016 protein.
Length = 533
Score = 31.5 bits (68), Expect = 6.2
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 GYENXXXXXGCPQ-VGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSN 399
G+E GC VG + + + +F + GKI +G GY F+ Y+
Sbjct: 51 GWEGPPPPRGCEVFVGKIPRDMYEDELVPVFERAGKIYEFRLMMEFSGENRGYAFVMYTT 110
Query: 400 PQNAAEAVKATNNCKL 447
+ A A++ NN ++
Sbjct: 111 KEEAQLAIRILNNYEI 126
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 182 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 236
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 408 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 442
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 239 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 293
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 6.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 459
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 31.5 bits (68), Expect = 6.2
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 346 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 450
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>BC130473-1|AAI30474.1| 522|Homo sapiens transducin (beta)-like
1Y-linked protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 874 GDDKKLIIWDIRTGQEKRSFP 936
G DK IIWD TG+ K+ FP
Sbjct: 295 GVDKTTIIWDAHTGEAKQQFP 315
>BC130471-1|AAI30472.1| 522|Homo sapiens transducin (beta)-like
1Y-linked protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 874 GDDKKLIIWDIRTGQEKRSFP 936
G DK IIWD TG+ K+ FP
Sbjct: 295 GVDKTTIIWDAHTGEAKQQFP 315
>BC113118-1|AAI13119.1| 1028|Homo sapiens contactin 6 protein.
Length = 1028
Score = 31.1 bits (67), Expect = 8.2
Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Frame = +1
Query: 724 YLATFHWRGVALWAGPKFSQFQ--KFFHPEARFISFSPCENYIVTFSPSGDRGDDKKLII 897
Y+ F G W+ K S + +F + I SP E + ++ G+ I+
Sbjct: 736 YIIMFRPVGSTTWSKEKVSSVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 898 WD-------IRTGQEKRSFPPPDEYVTWPIFRWSKMTGXSLXLELMF 1017
+ G +SF + V+W W++ TG L E+++
Sbjct: 796 YSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLY 842
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 31.1 bits (67), Expect = 8.2
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 298 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 435
+ K FS FG I+N E G + + F+ +S+P+ A+AV A N
Sbjct: 130 LQKEFSPFG-IINSANVMMEGGCSKRFGFVCFSSPEEVAKAVTAMN 174
>AF332222-1|AAK13474.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 874 GDDKKLIIWDIRTGQEKRSFP 936
G DK IIWD TG+ K+ FP
Sbjct: 295 GVDKTTIIWDAHTGEAKQQFP 315
>AF332221-1|AAK13473.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 874 GDDKKLIIWDIRTGQEKRSFP 936
G DK IIWD TG+ K+ FP
Sbjct: 295 GVDKTTIIWDAHTGEAKQQFP 315
>AF332220-1|AAK13472.1| 522|Homo sapiens transducin beta-like 1
protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 874 GDDKKLIIWDIRTGQEKRSFP 936
G DK IIWD TG+ K+ FP
Sbjct: 295 GVDKTTIIWDAHTGEAKQQFP 315
>AB003592-1|BAA82612.1| 1028|Homo sapiens neural adhesion molecule
NB-3 protein.
Length = 1028
Score = 31.1 bits (67), Expect = 8.2
Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Frame = +1
Query: 724 YLATFHWRGVALWAGPKFSQFQ--KFFHPEARFISFSPCENYIVTFSPSGDRGDDKKLII 897
Y+ F G W+ K S + +F + I SP E + ++ G+ I+
Sbjct: 736 YIIMFRPVGSTTWSKEKVSSVESSRFVYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 898 WD-------IRTGQEKRSFPPPDEYVTWPIFRWSKMTGXSLXLELMF 1017
+ G +SF + V+W W++ TG L E+++
Sbjct: 796 YSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNTGRVLGYEVLY 842
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,239,010
Number of Sequences: 237096
Number of extensions: 3669142
Number of successful extensions: 15438
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 14861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15410
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16679007690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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