Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K09
         (1182 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   1.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.9  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   2.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = +1

Query: 52  LLSIVGGSSRHTPXPIMLQLSQPSNFGXAFVLRSV--DWLEHLPWHXGAIVKTQKXRFEX 225
           L+ IVG        P M +++ P   G + V+  V   ++  + W    IV++Q+ RFE 
Sbjct: 70  LMRIVGIFPIKNTEPGMFRVA-PELLGYSVVVFVVVMGYIGFIEWDKVEIVRSQEGRFEE 128

Query: 226 NLLVKDFTAEQIQVKVADDFIVIEAK 303
            ++   FT   + + + +  ++ EA+
Sbjct: 129 AVIDYLFTVYLLPI-IINPLVLYEAR 153


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 298 AKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSADG 417
           A H ++ DEQ  ++     +Y L +G+ P+KI   L + G
Sbjct: 227 ASHLDQTDEQKTLNVAAGIQYWLDEGAPPSKINLGLGSYG 266


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 298 AKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSADG 417
           A H ++ DEQ  ++     +Y L +G+ P+KI   L + G
Sbjct: 227 ASHLDQTDEQKTLNVAAGIQYWLDEGAPPSKINLGLGSYG 266


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 298 AKHEEKKDEQGFISRHFVRKYKLPQGSQPNKITSTLSADG 417
           A H ++ DEQ  ++     +Y L +G+ P+KI   L   G
Sbjct: 226 ASHLDQTDEQKTLNVAAGIQYWLDEGAPPSKINLGLGTYG 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,734
Number of Sequences: 336
Number of extensions: 3974
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34537495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)