Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K09
         (1182 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family...    27   6.7  
SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    27   6.7  

>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 336

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 76  SRHTPXPIMLQLSQPSNFGXAFVLRSVDWLEHLPWHXGAIVK 201
           +R+TP    + L+ P   G  F L+SVD L    W    ++K
Sbjct: 183 ARNTPRFQAIALNPPLILGPVFHLQSVDNLNFSTWFFWQLIK 224


>SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 135

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 277 DDFIVIEAKHEEKKDEQGFISRHFVRKYKLPQGSQPNKI 393
           D+F+     HE KK  + F+   ++ K K     +PNK+
Sbjct: 11  DEFVAKLLIHESKKKNKSFVDHGYIEKEKTK--LRPNKV 47


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,667,255
Number of Sequences: 5004
Number of extensions: 64516
Number of successful extensions: 140
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 635506058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)