Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_K09
         (1182 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    97   1e-21
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   7.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 96.7 bits (230), Expect = 1e-21
 Identities = 43/101 (42%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +1

Query: 187 GAIVKTQKXRFEXNLLVKDFTAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKL 366
           G+ V   K +F+ NL V+ F+ E+I VK  D+ +++E KHEEK+D+ G++SRHFVR+Y L
Sbjct: 5   GSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYML 64

Query: 367 PQGSQPNKITSTLSADGVLKIVVPKETAVLK--DTAIPVAY 483
           P+G     I S+LS+DG+L I  P++    K  + +IP+ +
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITH 105


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 364 LPQGSQPNKITSTLSADGVLKIVVPKETAVL 456
           +PQGS        +  DGVL+I +P E  V+
Sbjct: 645 VPQGSILGPTLWNVMYDGVLRIPLPDEAKVI 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 921,069
Number of Sequences: 2352
Number of extensions: 14992
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 133660269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)